Burkholderia seminalis: WJ12_18220
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Entry
WJ12_18220 CDS
T04851
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bsem
Burkholderia seminalis
Pathway
bsem01501
beta-Lactam resistance
bsem02024
Quorum sensing
Module
bsem_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJ12_18220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WJ12_18220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsem02000
]
WJ12_18220
01504 Antimicrobial resistance genes [BR:
bsem01504
]
WJ12_18220
Transporters [BR:
bsem02000
]
Other transporters
Pores ion channels [TC:
1
]
WJ12_18220
Antimicrobial resistance genes [BR:
bsem01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
WJ12_18220
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
WJ12_18220
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
WJ12_18220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CtIP_N
ANG-1
DIMCO_N
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AOJ26847
LinkDB
All DBs
Position
3:529639..531159
Genome browser
AA seq
506 aa
AA seq
DB search
MRLLHPLPFARRIVALGVAAALTACSTLPPYSPPAVAVPAHYAGAPAAQAGWHVAMPADA
AARGAWWTVFDDADLNALEARVDVSNQTVKKAIADLQQARAMVDYQHAGFLPTITAGVAQ
SRARVSQNRLGSSLAGKTTPDYQAGVAASWEPDVFGRVRDAVAGAQANAAASAADLQAVK
LSVTAELATDYFALRSLDTQKQLLDDTVRAYSDALTLLKQQLAAGAIDASAVAQAETQLE
STRTQDTDIDASRAQLQHAIATLVGESASTFALPPRVQAFRVPAIPAGVPSQLLERRPDI
AAAERRVAAANARIGEARAAFFPDLVLSASAGLESAFFAPWLAAPSLFWSLGPQLAGTLF
DGGRRSASLRGAHAQYDGAVADYRQSVLVAFQQVEDQLSALDALASEAGSQQRATDAADL
SLRLTTNRFNAGAVSYLDVVTAQTIALTNRRTADQIDARRMEAEVALLKALGGGWQAGAD
VVSKAGTTERATAAQPAPAVTLPAAG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttcttcatccgctcccgttcgctcgccgcatcgtcgcgctcggcgttgccgcc
gcactgactgcctgctcgacgctgccgccctattcaccgcccgccgtcgcggtgcccgcc
cactacgcgggcgcaccggccgcgcaagccggctggcacgtcgcgatgcccgccgacgcc
gccgcgcgcggcgcgtggtggaccgtgttcgacgacgccgacctgaacgcgctcgaagcg
cgcgtcgacgtgtcgaaccaaacggtgaagaaagcgatcgccgatctgcagcaggcgcgc
gcgatggtcgactatcagcacgccgggttcctgccgacgatcacggcaggcgtcgcgcag
agccgtgcgcgcgtgtcgcaaaaccggctcggctcgtcgctcgccggcaagacgacgccc
gactaccaggccggcgtggccgcgagctgggaacccgacgtattcggccgagtgcgcgac
gccgtagcgggcgcgcaggcgaacgccgccgcgagtgcagccgacctgcaggccgtgaag
ctgtcggtcacggccgagctcgcgaccgactatttcgcgctgcgctcgctcgacacgcag
aagcagctgctcgacgatacggtgcgcgcctactcggatgcgctgacgctgctcaagcag
cagctcgcggccggcgcgatcgacgcatcggcggtcgcgcaagccgagacgcagctcgaa
tcgacccgcacgcaggacaccgacatcgacgcgtcgcgtgcgcagttgcagcacgcgatc
gcgacgctcgtcggcgaaagcgcgtcgacgttcgcgctgccgccgcgcgtgcaggcgttc
cgcgtgccggcgattccggccggcgtgccgtcgcaactgctggagcggcggcccgacatc
gcggcggccgaacgccgggtcgcggccgcgaacgcgcggatcggcgaggcgcgcgccgcg
ttcttccccgatctcgtgctgtcggcgagcgccggcctcgaaagcgcgttcttcgcgccg
tggctcgccgcaccgagcctgttctggtcgctcggcccgcaactcgccggcacgctgttc
gacggcggccgtcgcagcgcatcgctgcgcggcgcgcacgcgcagtacgacggcgcggtc
gccgactaccggcagtccgtcctcgtcgcgttccagcaggtcgaggatcagttgtcggcg
ctcgatgcgcttgcgtccgaagccggcagccagcagcgcgcgaccgacgcggccgacctg
tcgctgcggctgacgacgaatcgcttcaacgcgggcgccgtcagctatctggacgtggtg
accgcgcagacgatcgcgttgacgaaccggcgcacggccgatcagatcgacgcgcgccgg
atggaggccgaagtcgccttgctgaaggcgctgggcggcggctggcaggcgggcgcggac
gtggtatcgaaagccggtacgacggaacgagcaacagccgctcagcccgcccccgccgtc
acgctgccggcggccggttga
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