Brasilonema sennae: DP114_23370
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Entry
DP114_23370 CDS
T10102
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsen Brasilonema sennae
Pathway
bsen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DP114_23370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsen03019
]
DP114_23370
03400 DNA repair and recombination proteins [BR:
bsen03400
]
DP114_23370
Enzymes [BR:
bsen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DP114_23370
Messenger RNA biogenesis [BR:
bsen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DP114_23370
DNA repair and recombination proteins [BR:
bsen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DP114_23370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RHH_9
Motif
Other DBs
NCBI-ProteinID:
QDL10442
UniProt:
A0A856MIP1
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All DBs
Position
5511064..5512512
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AA seq
482 aa
AA seq
DB search
MNPSATASWNEVRAAFQKIWGYEDFRPPQGEIIQSLLAKKDALIIMPTGGGKSICFQLPA
LLQQGLTLVVSPLVALMENQVQELRERRIPAALLHSELPSDKRRITLQALERQQLRLLYL
SPETLLSKPVWERLCQPELVINGLILDEAHCLTQWGDTFRPAYRRLGAVRPALLKSKPLG
TNIALAAFTATADPLAQTQIREILQLQEPAVFRINPYRSNINPSIRIVWTPRGRKQQFLK
FLSDKAQQTGLVYVRTRRDSEELAKWLLELGYVTAAYHAGLGAEERRDIEAQWLSGKMPF
VICTCAFGMGINKSDVRWVVHFHPPLLISEYVQEIGRAGRDRKPAQALMLISEPTGWLDP
QDKQRQKFFEENLQQQQLDAQQVLKKLPRTGEVNAVAREFRDGAIALSLLHSTGQLKWLD
PFHYSIVPGAKTKSVTQLHATKQMNQYLTTRDCRWRFLLSAFGFEEEIKNWRCGHCDNCC
RK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttctgcaacagcatcttggaacgaagtccgcgctgcatttcaaaaaatctgg
ggttatgaagatttccgtccaccgcagggagaaattatccagagtttgttggcaaaaaaa
gatgcgctgattatcatgcccacaggtgggggaaagtcaatttgttttcaacttcccgca
ctgctacaacagggattaaccctcgttgtttcgcctttggtggcgctgatggaaaaccaa
gtgcaggaacttcgggaacgtcgaatacccgctgcccttttgcatagtgaattaccatct
gataagcggcgtatcactttacaagctttggaacgacaacaactcagattactttacttg
tcgccagaaactttactcagcaagccagtgtgggaaaggttgtgtcagccggaacttgtg
attaatggattgatactagatgaagcgcactgtttgacacagtggggagacacttttaga
ccagcttaccgaagattaggggcagtacgaccagcgctactcaaatcaaaaccattggga
acaaatatagcgctagccgctttcaccgccaccgctgaccctttagcccaaactcaaatt
cgagaaattcttcagttacaggaacctgcagtttttcgtattaatccttatcgttctaat
attaatccttctattcgtatagtttggactccaaggggaagaaagcaacaattcttaaaa
tttctttcagataaagcacaacaaactgggcttgtttacgttcggacaaggcgagatagc
gaagagttggctaaatggctgctagagttgggttacgttacagcagcttatcatgcagga
ttaggcgcagaagaacgccgcgatatagaagcacaatggctgagtggaaaaatgccgttt
gtcatctgtacgtgtgcttttggtatggggataaataagtcagatgtccgttgggtggtt
cattttcacccgccattgttgatatcagagtacgtgcaggaaattggacgcgctggacga
gatagaaaaccagcccaagcactgatgttgatcagtgaacctacggggtggttagatcca
caagataagcaaagacaaaagttttttgaggagaatttgcagcagcaacagctagacgcg
cagcaagtcttgaaaaaattgccgagaacgggagaggtgaatgctgtggcgcgagaattt
cgtgatggtgcgatcgccctctctctactacacagcaccggacaactcaagtggcttgac
ccctttcactacagtatcgttccaggggcgaaaaccaaatcagtcacacaattgcacgcc
accaagcaaatgaatcaatatcttactactagagattgtcgctggcgttttttattgagt
gcttttggttttgaggaagaaattaagaactggcgttgtggtcattgtgataattgctgc
cgaaaataa
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