Peribacillus simplex: UP17_15575
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Entry
UP17_15575 CDS
T04304
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsj
Peribacillus simplex
Pathway
bsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UP17_15575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsj03019
]
UP17_15575
03400 DNA repair and recombination proteins [BR:
bsj03400
]
UP17_15575
Enzymes [BR:
bsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UP17_15575
Messenger RNA biogenesis [BR:
bsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UP17_15575
DNA repair and recombination proteins [BR:
bsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UP17_15575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Arylesterase
Motif
Other DBs
NCBI-ProteinID:
AMM93715
UniProt:
A0A9W3WMA2
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All DBs
Position
complement(3367295..3368806)
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AA seq
503 aa
AA seq
DB search
MNIERVLKEKFGFDEFRPGQKEVIESLMSGRHTLAMLPTGSGKSLCYQLPAYLLNKTVLI
VSPLLSLMQDQADQLKMSGEKSVLTLNSFLTLNQKRKALDRLHSYRFIFLSPEMLSLESV
LKSLKSIEIGLFVIDEAHCISQWGYDFRPDYLNLGEVRRELKNPLTLALTATATTEVRRD
IVSKLEIGQAEEIVSSVDRENIAIIVERLISYDEKLSRVLELVRKLTGSGIIYFSSKKVA
ESVTGFLQENGIDSVNYYHGGMEQEQRMLIQQQFISGQLKIICATSAFGMGVNKSDVRYV
IHFHMPSTMEAYLQEIGRAGRDRKQSVAVLLYCEGDEGLPLRLMEQQLPTDMQIEGVCSF
LNASQKGLANFTLSEKEQLSQSFSLNDIQLRFFSQLINGTKNPLDQMSEMKEYCQKRKSG
NQEKLHKFLHWLYARECRRIGILHYFEEKQRVVNPICCDICGMDAEKMADVWPEVKVDPV
NPFSTWKNELALILLKKENGNEK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagaacgtgtcctaaaagaaaaatttggatttgatgaatttcgtcctggacaa
aaagaagtgatcgaatcattgatgtccggacgtcatacattagcgatgctacccaccgga
tccggtaaatcattgtgttatcagctgccggcttaccttttaaataagactgtcctaatt
gtctccccattattatcattaatgcaggatcaggcagatcagctgaagatgagtggcgaa
aaaagcgtattgaccctcaattcttttttgacgctaaatcaaaaaaggaaagctctcgat
cgattacatagttatcgttttatctttttatctcctgaaatgctaagtcttgagagtgta
ctaaaatccttgaaatcgatagaaatcggtttgttcgtcatagatgaggcacactgtatc
tcacaatggggttacgatttccgtccggattatttgaatttaggagaagtgaggcgtgag
ttgaaaaatccgttgacgcttgccctgacagcaactgcaaccactgaagtccgaagggac
atcgtaagtaaactcgaaattggtcaagccgaagaaatcgtctcatctgttgatcgggaa
aatattgcaataattgtcgagcgcctgatcagttacgatgaaaagctatcccgtgtactg
gagcttgtcaggaaattgacagggagcggtattatttatttttcatctaaaaaggttgcg
gaatcggtcactggttttttacaggaaaacgggattgacagtgtcaattattatcacggt
ggcatggaacaggaacaaaggatgctcattcagcagcaattcatttctggtcagttgaaa
attatatgtgcaacaagtgcttttggcatgggtgtaaataaatcggatgtcagatacgtt
atccattttcatatgccatccacgatggaagcatatcttcaggagataggcagggcggga
cgagatcggaaacaaagtgtcgctgtcttattatattgcgaaggggatgaagggcttccc
ttgcgtttgatggaacaacagttacctacggatatgcaaatcgagggtgtttgttctttc
cttaatgcttcacaaaagggtttggcgaatttcaccctatcagaaaaagaacagctgtct
caatctttttctttgaacgatatccaacttcgatttttttcccagctcattaatggaact
aaaaatcctttggaccaaatgtcagaaatgaaagagtattgccaaaagaggaaatccggt
aatcaagaaaagctgcataaattccttcattggttatatgcacgtgaatgtcgccgtata
gggatactgcactactttgaagaaaagcagcgagtagtgaaccccatttgctgtgatatc
tgtgggatggatgccgaaaaaatggctgatgtatggccggaagttaaggttgatccagtt
aatcccttttccacgtggaaaaatgaattggctttaatcttattaaagaaggaaaatggg
aatgaaaaataa
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