Betta splendens (Siamese fighting fish): 114857087
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Entry
114857087 CDS
T08231
Name
(RefSeq) contactin-1a-like isoform X1
KO
K06759
contactin 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04514
Cell adhesion molecule (CAM) interaction
bspl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114857087
04517 IgSF CAM signaling
114857087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114857087
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bspl00537
]
114857087
Cell adhesion molecules [BR:
bspl04515
]
Immunoglobulin superfamily
Contactins
114857087
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bspl00537
]
Others
114857087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
Fn3_VIN3
Ig_PDGFR_d4
fn3_2
Motif
Other DBs
NCBI-GeneID:
114857087
NCBI-ProteinID:
XP_029009054
UniProt:
A0A6P7MS84
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All DBs
Position
6:14904195..14952279
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AA seq
1017 aa
AA seq
DB search
MLHLTLLLHLLALLLSADASVHEEVPDFYADEATGYGPFFEEQPVDTIYPEESPEAKITM
NCRAQANPPATYKWRLNNVLIDLTEKDSHYSLAGGNLVISSPIKTKHEGKYSCLATNPYG
TVISQEGSVQFGYLDLFSSEERETVKVKEGQGAVLLCAPPPHYPADLSFRWILNEFPTFI
PLDNRRFVSQKTGNLHISKVDSSDTGNYSCIASSPSISKSVFSNYIPLVPQAERPNRKYP
ADLEVKFPDTTALVGQNITLECFALGNPVPEIHWKRIGGNLPPSHEVRMAGAQLHLFNVQ
PEDEGTYRCEAVNSKGKDHHTARVYVEAFPEWVEHIRSTEKDLGSDYTMNCVASGKPKPH
IRWLKNGEPLDRKEMRFSSLTFDDSGMYQCMAENRHGVVYANAELRVFACAPTFEHSPVK
RVLAARNGRVVIVCRPKAAPKPTFSWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRY
TCFAENDRGKANSTGSLLVTDSTKITLAPSNADVKVGENAWMQCAASHDPALDITFIWSV
DGQVIDLHKESRHYERTPNGSSNGELLIKNAQLKHAGLYTCTAQTPVDNVTASAHLVVRG
PPGAPGGVRVINKSDKSVTLQWSRGADNHSPISKYTIQYRDAFSKEVWKNATTSPADVEG
NAEAATVVDLFPWTEYEFRVIATNTLGTGESSSPSPKEKTLEAVPVVAPSDIGGGGGTSR
ELTITWTPVQPQYYYGPNFGYIVAFKPQDDNEWMKVTVADPQAKRYVHKDSSIPPSTEFH
VKVKAFNSAGEGPYSLTAVIYSAQDAPSEAPSGVEGRALSATEAFVSWLPLPQSNIDGYQ
LKYWRNQEDSEGGAQRVVVPSRENHTRLEGMKPNSHYVVEVRGYNTAGFGPSNTISIHTK
KAPPSQAPRIIRQKLKGKSINLAWENVEPLANEASINGYKVLCRQQGHSTGPVYITSHRH
IEVPLPEEGNYVVEVRAHTEGGDGAVTRINITGGGVMAARSLGLLSLLLVALLCLSL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacctcacgctgctcttgcacctcctggccctcctcctctctgcagatgcatca
gtgcatgaggaggtacctgacttttatgcagatgaagccacaggttacgggccgtttttt
gaggagcagccagtggataccatctacccggaggagtcgcccgaggccaaaatcaccatg
aattgtcgcgctcaagccaatccacctgccacatacaagtggagactgaacaatgtgctc
attgatctgactgagaaggacagccactacagcttagcaggaggcaacctggtcatcagc
agcccaatcaaaaccaaacatgaaggaaaatacagctgcttggcgacgaacccctatggg
acggtcatcagccaggagggttccgtccagtttggatacctcgatctcttctcgtcagag
gagagggagacagtgaaagtcaaagagggacaaggggcagtgctgctttgtgccccccca
ccgcattatccagctgatctgtcgttccgatggatcctcaatgaatttcccaccttcatc
ccgttggacaacaggcgatttgtctcccagaaaactggtaaccttcacatctccaaggtg
gactcatcagacaccggcaactactcctgcattgcgtccagcccatccatttccaagagt
gtcttctccaactacattcccttagtgcctcaggctgagcgtcccaacaggaaatacccc
gctgacctcgaagtcaagttcccagacaccacagctctggtcggtcagaatatcacactg
gagtgctttgctttggggaaccccgtccctgagatccactggaagcggataggaggaaat
ctgcccccgagtcatgaggtgcggatggcaggggctcagcttcacctgttcaatgtgcag
cctgaagatgaagggacttatcggtgtgaagccgtgaattcaaaagggaaggaccatcac
acggcacgagtgtatgtagaagcttttcctgagtgggtggagcacatcagaagcacagag
aaagacctcggcagtgactacaccatgaactgcgtggccagtggcaagcccaaaccacac
atccgctggctgaagaacggcgagccgttggaccggaaggagatgaggttcagcagcttg
acgttcgatgattctgggatgtaccagtgtatggcagagaaccgccatggcgtcgtctat
gccaacgcagagctgcgtgtgttcgcctgcgcgcccacgttcgagcacagcccggtgaag
agagtcctcgcagctagaaacggccgggtggtgattgtatgtcgacccaaagcggctcca
aagcccactttctcctggagcaaagacacggagctgctttccaactccaccagagtgttt
atctgggaggatgggagcctggagatcctcaacgtgacgcgagcagacgagggcaggtac
acctgctttgccgagaatgaccgaggcaaggccaacagtaccggctcgctactagtcaca
gactccacaaagatcaccttggcaccgtccaacgctgacgtcaaagtcggtgagaacgcg
tggatgcagtgcgccgcgtctcatgaccccgccctggacatcaccttcatctggtccgtg
gacggtcaggttatcgacctacacaaggagagccgacactatgagcgcaccccgaatgga
agctccaacggtgagctcctgatcaagaacgcccagctgaagcacgccggactctacacc
tgcaccgcacagacgcccgttgacaatgttacggcctctgctcacctcgttgtcaggggt
ccgcccggcgccccgggaggggttcgagtgataaacaaaagtgacaagagtgtaacgttg
cagtggagccgtggagccgacaaccacagtcccatctccaaatataccatccagtacagg
gacgccttctccaaagaagtctggaagaatgccactacatcccctgcggatgtagaaggg
aacgcagaggcggccacggtggtcgatttgttcccctggacagagtatgagttcagggtt
atcgccaccaacactctgggtacaggagagtccagcagcccgtcgcctaaagagaaaaca
ctggaagcggttcctgtggtggcgccctcggacatcggcgggggtggagggacaagcaga
gaactgaccattacatggacgcccgtgcagccacagtactactacgggcctaatttcggc
tacattgtggcctttaaaccccaagacgacaacgagtggatgaaggtgacggtggctgat
ccgcaggccaaacgctatgtccacaaggactcgtccatccctccctccacagagttccac
gtgaaagtcaaggcattcaacagcgcaggagaggggccctacagcctaacagccgtcatt
tattcggctcaggatgctccatctgaagccccttcgggtgtcgaaggcagagccctctcc
gccacagaagcctttgtgtcgtggctgcctctcccacagagcaatatagatggataccag
ctgaagtactggaggaatcaggaagacagcgagggcggggcccagagggtggtggttccc
agccgggagaaccacaccaggctggagggaatgaagcccaactcacactacgttgttgaa
gttcggggctacaacactgcaggattcgggccctccaacactatcagcatccacaccaag
aaagcccctccaagccaagcccccagaataatacggcaaaagttaaagggcaagtctata
aatcttgcctgggaaaacgtggaaccactggctaatgaagcatcgataaatggctacaag
gtgctgtgcaggcagcagggccactccacaggccccgtgtacataaccagccacaggcac
atagaggttcccctgcccgaggaggggaactacgtggtggaggttcgggcgcacacggag
ggaggagacggcgctgtgacgcggatcaacatcacaggtgggggtgtcatggccgcccgg
tctctcggcctcctctccctgctcctggtggccctcctctgcctcagcctctga
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