Betta splendens (Siamese fighting fish): 114862249
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Entry
114862249 CDS
T08231
Symbol
skic3
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114862249 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114862249 (skic3)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
114862249 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_17
TPR_14
TPR_8
TPR_12
TPR_11
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_6
HAT_Syf1_CNRKL1_N
TPR_15
Fis1_TPR_C
DUF6979
YceG_bac
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
114862249
NCBI-ProteinID:
XP_029018203
UniProt:
A0A6P7NL25
LinkDB
All DBs
Position
9:18991600..19003276
Genome browser
AA seq
1569 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELDQPDQSQ
TAYKKAVELEPDQLLAWQGLANLYEKTDQWDFKVELPNVYQKLVDLYAGSDKSKCYEVIK
KLSDIYESDKEYLKLGNIWRQLIQLKEEEAVDKKELLQLWQQLTQHLSDYLNEEEQDNET
QQHLITAFEKAMVLMDPVPGEEHKKISADYVKCLSKLPQEEVKMKEACEAMLSLYPNQIY
PLEILCSHYLKTGILSGDAVSFFSRLLDLAPNNSLGHMGLGTIALHEGRYKEAIAELTQG
LKNLSCSTGWYNLAEAQFKTHRYSDSAASCSQGLSVCVPEDKALRVKLLKLKLEMLVRSG
EMKSADKALETFTQIPDAGKDPFLLALKGYAHLNKGQTDEAHKISSELVASNPNLGQGFA
LRGLEQLAEGQQQFAEQSFLKAVSKSPECGEYYFLLGKLYWDMGEETRKDRSKAHTHLLK
AAKLDPYLGRTFRYLGHYYQEVAKDHSRARGCYKKAFELDNDDAESGAASVDLSMKQDDM
DTALEILQAVIVKATPGSAKWAWMRRGLYYLKAGEHQQAIADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQILGKFKEAVTEYLQITAQQDY
VPALKGLGECQLSLAKGLMEDCRDGGAIDLIQQAIQNLYRAVLLRPDLSCLWKLLGDACT
TVSAVSPNRAQILVPGLLAGLDCNSQSHRLNQAETLKVGERCYARALKLMSEVPSLWYDL
GLNYYHQACLPLPTEEDQSSRSLVLEKAQQCVKKAIMMESGNHIYWNALGVISMSKGLEN
FALAQHCFIKSIQVESSNVVAWTNLGALYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPCAFLMLGYLNEHLQLKRQALQAYQRAVELLKSTSSTEELLFA
VSSYGRALSALGQWEEAVRAYNSTPLQELSDVTGLALAYCRAGLIPDSINAYERALAVAS
SEKEKAYILTALALLQHRQDNLDSAKTLLFKCSMLKEPVPESLLCLCALGLVHNDVTLAT
AALTELLKQDAASGNVVEQRCLLTCTLLALQGNFSAVQREASRAVHSNPGNPSLWALLSR
VIPQYNPIKANGGAMAGHVACLNSMTQGKRALLYSGVNQLASGRHSGEDCHRNALKTMQR
AVLLCPDDPATWAGLMAACHTENVSCYLSGSPPCRQGLEQILMSVVSEKVHSVEEIERPL
AQSLEGWVLRQAVTGLMLGGQLDQAEALCTQVLSVSPEHPVGMLLLRQVQCQRLLLADSG
TVLPDSVLQQLNSTVMVNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQIASQFGLHSS
QAASLLRLALLALGPCMAGVPGNDWKDLIVEATTEVLKLGSSPVAYLIQALLQYVTKSAA
RDTRRLLERLVYVDSQDVPLTVVQVASWYLLRHLHGKNDQELINVLLQRAKMNGDKRLLE
FNALLASSS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaagcggcactgaagagtgccagagaagccattaaaaacaaa
gaattcaaagaggcgctaaaacactgcaaggctgttttgaaactggagaagaacaattat
aatgcatgggtattcattggcctggcagccagtgaacttgaccaaccagatcagtcacag
acggcttataaaaaggcagttgagctggagcctgatcaactgttggcgtggcagggctta
gcaaacctttatgagaagactgatcagtgggattttaaagtagagttacccaacgtctat
cagaagcttgttgacctgtatgcagggtcagacaaaagcaaatgttatgaggtgattaaa
aagctgtctgatatttatgagtctgacaaagaatatttaaagctaggaaatatttggcgt
cagctcattcagctaaaggaagaagaggccgtggacaaaaaagagttactgcagctgtgg
cagcagttgacccagcatctctctgactaccttaatgaggaagagcaggacaatgaaaca
caacaacatctcatcacagcatttgaaaaggccatggttctcatggatcccgtccctgga
gaggaacacaagaagatctctgctgactatgttaaatgcctttctaagctaccacaggaa
gaagtcaaaatgaaagaggcgtgtgaggcgatgctgtccctataccccaaccaaatttat
ccgcttgaaatcctttgttcacattacctcaaaacaggaattctgagtggggatgcagtt
agttttttctctcggctcctggatctggcccctaacaacagcttaggccacatgggtctc
ggcactatagcactccatgaaggacggtataaggaagctattgcagagcttacacaaggg
ctgaaaaatctgagctgcagtacaggatggtacaatctggctgaagcgcagtttaaaaca
cacagatactcggacagcgcggcatcgtgctcccaaggtctgtcagtgtgtgttcctgaa
gacaaagcgcttcgggtcaaattgctcaagctgaagcttgaaatgctagtcagaagcgga
gaaatgaaatctgcagacaaagctttggagacattcacacagattccagatgctggaaaa
gacccatttttattagccctcaaaggatatgctcatcttaacaaaggacaaactgatgaa
gcacataagatctcttctgaactggtggcgtccaacccaaacctgggccaggggtttgct
ttgagaggattggagcagttagctgaaggacagcagcagtttgcagagcagagtttccta
aaggcagttagcaagagcccagaatgtggagaatattattttcttctgggaaaactctac
tgggatatgggagaagagacacgtaaagacagaagcaaagcccacacgcacctgctgaaa
gctgcaaagttggatccataccttgggaggacattccgctaccttggtcattactatcag
gaggtggcaaaggatcatagccgtgcacgcggatgctataaaaaggcctttgagttagac
aacgatgatgcagagtctggagctgcgtcagtggacctcagtatgaagcaggacgatatg
gacactgccttagaaatacttcaggctgtcatagtgaaagctactcctggctcagcgaaa
tgggcctggatgagaagaggcctttactacctgaaggctggagagcatcaacaggccata
gctgatctgcaggctgctctgagagcagaccctgaggactgggtgtgttgggagtgttta
ggtgaagcttatctaaatcgccggagcttcacagccgctctaaaggcctttggcaaggcc
catcagcttcagccctcctccatctacagcgtgtaccaagctgctgcaatcaaacagatt
ctgggcaagttcaaggaggcggtcacagagtacttgcaaatcacagcacagcaagactat
gttcctgcactgaaaggcctaggggagtgccagctgtcactggcaaaaggtttaatggag
gattgcagggatggaggagccattgacctcattcagcaagctatacaaaacctttacaga
gctgtacttctgcgtccagacttgtcctgtttgtggaagctcttgggagatgcttgcacc
acagtcagtgccgtgtctccaaacagagcccagattctggtgcctggcctgctagctggt
ttagattgcaacagccagagccacagactcaaccaagctgagacacttaaagttggtgag
aggtgctatgctcgcgctttgaagctgatgtcagaggtccccagcctttggtacgactta
ggacttaactattatcaccaggcctgcttaccactccctacagaggaagaccagagctct
cggtctctggtcctagagaaggcccagcagtgtgtgaaaaaggctatcatgatggagagt
ggaaaccacatctactggaatgccctgggagtgatttccatgagcaaaggtcttgaaaac
tttgctctggcgcaacactgctttatcaagtccatacaagtagagtcaagtaatgtcgtt
gcctggacaaaccttggtgccctgtatttgaaaaaggacaacatagagcttgcacatgag
gcctttaagattgcgcagtccttggaaccgctgtatgtgaactgctggatcgggcaggcg
ctgatagcagagcgagtgggaagctatgacaccatggatctattcaggcacactactgaa
ctcagcacacatatggaaggagtgaaaggttatgcttactgggtatgttccacgctgctg
gataagagcaacagagactctgagctgtaccgctacaacatagtccagatgaacgcaatt
tctgctgctcaggtggcactcagcaagtacacagagagaatccagtctgacccttgtgcc
ttccttatgcttggatacctgaatgagcatctgcagctgaagaggcaggccctacaggcg
taccagagggctgttgaactacttaagtcaacgtcctccacagaagagctgctgtttgca
gttagcagctatgggcgcgcattaagtgcattaggccagtgggaagaagcagtgcgtgct
tataattccactccactgcaggaactcagtgatgtgactgggctggctctagcatactgc
agagcagggctcatccccgacagcatcaatgcatatgaacgtgccttggctgtggcttcc
agtgagaaagaaaaagcctacatcctgacagctctagctctgctgcaacaccggcaggac
aacttagactcagccaagactctactgtttaaatgctcaatgttaaaagagccagttcca
gagtccctgctatgtttatgtgctctgggattggtccataacgatgttacattagctact
gctgcactgactgagctgctgaagcaagatgcagcctccggaaatgttgtagagcagcgg
tgcctgctcacctgcaccttgctggccctgcagggcaacttcagtgccgtgcagagggag
gcttctagagctgtacacagcaaccctggaaatccatctctgtgggcattgctctctaga
gtgataccacaatacaaccccataaaggcaaatggtggggccatggctggacatgttgct
tgtcttaacagtatgacccagggaaagagggcgctgttgtacagtggagtgaatcagttg
gctagtgggagacactcaggagaggactgtcacaggaatgcactgaagactatgcagaga
gctgttctcctctgtcctgatgatccggctacatgggctggattaatggctgcctgtcac
acagaaaacgtttcgtgttacctttctgggtctcctccttgccgacaaggactggaacag
attctcatgtcggtggtttctgagaaagtgcacagtgtagaggagatagagcgcccacta
gcccagtccctggaaggatgggtgctacgacaggcagtgactggtctcatgctgggggga
cagctggatcaggcagaagccctatgcacacaagtgctgagtgtttcccccgaacaccca
gtagggatgctgttgctgagacaagtccaatgtcagcgcctccttttggctgatagcggt
actgtcctccccgactctgtcctacagcagctcaacagcaccgtgatggtgaaccccacc
aaccttggggcctggcattggctggctgaggtttatcgtagccagggtctgctggtccag
gcagttatggcttacaggcagagtctgcagattgcctctcagtttggtctgcacagcagc
caggcagccagcctgctccggttggccctgctagccctgggaccctgtatggcaggcgtc
cctggaaatgactggaaagacttgatagtggaagccactactgaggttttgaagctcggc
tcgtcccctgttgcctacttgattcaggccctgctacagtatgtgaccaagtcagcagcc
agggacacgcggcgtctgctggaaaggctggtgtatgtggactcccaagacgtcccgctg
acggtggtgcaggtggccagctggtacctcctcagacacctgcatggcaaaaatgaccag
gagctaataaatgtccttctgcagcgtgccaaaatgaatggagacaaaagactgctggag
tttaatgcactgcttgcctcttcatcctga
DBGET
integrated database retrieval system
