Betta splendens (Siamese fighting fish): 121201890
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Entry
121201890 CDS
T08231
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
121201890
04121 Ubiquitin system [BR:
bspl04121
]
121201890
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
121201890
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121201890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
zf-C2H2_12
zf-met2
Motif
Other DBs
NCBI-GeneID:
121201890
NCBI-ProteinID:
XP_040924669
UniProt:
A0A8M1H8A6
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Position
21:complement(637758..640627)
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AA seq
587 aa
AA seq
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MEQEPVPKRVRSYVWEHFDLISPRKVKCLICAQELTYSSNTSSMLRHLRAKHPETTPNTA
ATDASAAAAGGAGVGAQQGRQAELDEALVNMIVLDAQPFKVVEDKGFRAFVQKLDPTYVL
PSRQTLKSMVDKKYEEAKKKSINELEKAEAVSVTADMWTSITMEAYLGVTCHFINENMEL
ASVLLGVGHFTQSHTAENLRDAMELQLQRWGLRHKVHCLITDNASNMILCAKLMAVRNLP
CFAHSLNLVVKKALEQTPVLTDIRTRGRRIVTFFKSSVKAKEKLAEVQNHLQTPPHKLLQ
EVDTRWNSTYLMLKRLHEQREAVSAALASIPTDIPPLVSLDYDAISECLEVLAPFYLATT
ELSAERIVSGSKVIPIIRMVQHKLASKAAGLKNETAGLLCQNLQQILATRCNVETIRVLA
LSTLLDPRFKTLAFGSQSYAQEAVAKLTAECATTIRGESAEPSTSQSAAMSEPNPEAGAV
DNLWELLDSRVGATQQIPNPTANATVEVQRYLSEPYLSRGEDPLAYWKTRATTYPLLFSL
AKKYLHMPATSVPCERVFSKAGEVASRRRSRLKPRTLETILFLNKNL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagagccagtgccaaaaagagtccgctcatatgtctgggagcactttgatctt
atcagccccagaaaggtcaagtgtttgatttgtgctcaggagctgacttatagcagcaat
acatcatccatgctgcgacatctgcgagccaaacacccagaaaccacacctaatacagca
gcaactgatgcatctgctgctgctgcgggtggagctggagttggagcccaacaaggccga
caagcagagttggatgaggcactggtgaatatgattgtgctggatgcacagcctttcaaa
gtggtggaagacaaaggcttcagggcctttgttcagaagcttgaccccacgtatgtcctg
ccttctcgacagactttaaaaagtatggtggacaaaaaatatgaggaagccaagaagaag
tccataaatgagttggagaaagcagaggcagtcagtgtgactgctgacatgtggacatcc
atcactatggaggcatatcttggggtcacttgccactttattaatgagaatatggagcta
gcaagtgttttgcttggtgtggggcattttacacagtcccacacagcagagaacctgagg
gatgctatggagctgcagctgcagaggtggggtttgagacataaagtgcactgcttaatt
acagacaatgcaagcaacatgattttatgtgcaaaacttatggccgtgcgaaatttgcca
tgctttgcacatagtttaaatcttgttgtgaagaaggctctggaacaaactcctgttctc
acggacattagaacaagagggagaagaatcgtaacattttttaaaagcagtgtcaaggca
aaagaaaaactcgcagaggttcaaaatcacctccaaactccaccacacaaactcctccaa
gaagttgatacgcggtggaattctacatacctcatgttaaaacgactacacgaacaacgt
gaagcagtcagtgcagctctggcatccataccaacagacatacccccccttgtatcactg
gactatgacgctataagcgaatgtttagaagtgcttgcaccattctatttagctacaacg
gagttgtcagcggagcgaattgtatcaggatccaaagttatacctattattagaatggtg
caacacaagctggcatctaaggctgcaggattaaaaaatgaaacggcaggtcttctgtgc
cagaacctacagcagattttggcaacaaggtgcaatgttgaaacgatccgagtcctcgct
ttgtccaccctcctggaccctcgttttaaaacattggcatttggaagtcaaagttatgct
caggaggctgtggctaaactgacagcagaatgtgcaacaacaatacggggggaaagtgca
gagccatcaacatcacagtcagcagcaatgtcagagcccaatcctgaggcaggagctgtg
gacaacttatgggaactgttggacagcagagtgggagcaactcaacagatcccaaatcca
acggcaaatgcaactgtggaagttcagcggtacctgtctgagccgtacctctccagagga
gaagacccgctcgcttactggaagacacgcgcaacgacgtatccactacttttcagtttg
gccaaaaaatatctccacatgccagcaacatctgtgccgtgcgagcgggtcttctccaaa
gctggagaggtggcaagccgaaggaggagcagattaaaaccacgcactttggaaaccatt
ctttttcttaataaaaatctttga
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