KEGG   Bacillus subtilis QB928: B657_39110
Entry
B657_39110        CDS       T02292                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
bsq  Bacillus subtilis QB928
Pathway
bsq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B657_39110 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsq03019]
    B657_39110 (deaD)
   03009 Ribosome biogenesis [BR:bsq03009]
    B657_39110 (deaD)
Enzymes [BR:bsq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     B657_39110 (deaD)
Messenger RNA biogenesis [BR:bsq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B657_39110 (deaD)
Ribosome biogenesis [BR:bsq03009]
 Prokaryotic type
  rRNA helicases
   B657_39110 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 CMS1
Other DBs
NCBI-ProteinID: AFQ59763
LinkDB
Position
complement(3947218..3948690)
AA seq 490 aa
MRTSARDRSLYMSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTG
SGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSS
FDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAII
KHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFS
LLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRG
EYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEK
RFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNKDIMKLYFN
GGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKG
KQLKVNKANK
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgagaacatctgcaagagacaggagtttatacatgagtcattttaaaaactatcaaatc
agtcatgacattttacgagcattggaaggactgggatatacagaaccgaccaaggtgcag
cagagtgtgatccccgctgcccttgaacgaaaggatcttgtcgtcaaatcacagacagga
agcgggaaaacggcttcgttcgggattcctctctgtgagctggcgaattgggatgaaaac
aagccgcaggcgcttattttaacaccgacccgtgagcttgcggtgcaagtaaaggaagat
atcacgaacatcggacgatttaaacggatcaaagcgacagccgtatttggaaaatcctcc
tttgataaacaaaaagctgagcttaagcaaaaaagccacattgttgtcggcacgccggga
cgtgttctggatcatatcgaaaaaggcacgctgccgttggatcgtctctcttatttggtc
attgatgaagcggatgagatgctgaatatgggcttcattgagcaggtggaggcgattatc
aagcatctgccgactgagcgtacgacgatgctgttttcagcgacgcttccgcaggatatc
gagaagctgagccgtcaatatatgcaaaaccccgagcatatcgaggtcaaagcggccggc
ctaaccacaagaaatattgaacatgcggtgattcaagtaagagaagagaataagttttca
ttgctgaaagatgtgctgatgacggagaatcccgacagctgcatcattttctgccgaacg
aaggagcacgtcaatcagctgaccgatgaattggatgacttgggatatccatgcgataaa
attcacggcggaatgattcaggaagaccgattcgacgtcatgaatgaatttaaacgtggc
gagtaccgttacttagtggcgacggatgtcgccgcgcgcgggattgatattgaaaatatc
tcccttgtcatcaactatgatctgccgcttgaaaaagaaagctatgtccaccgcacgggc
cgaacgggacgcgcagggaacaaaggaaaggccatttcgtttgtcacggccttcgaaaaa
cggtttttagccgacattgaagaatatatcggatttgaaatccaaaaaatagaagcacct
tctcaagaggaagtggcaaggaagaaaccagaatttctagctaaactgaatgaccgtccg
gaaagcaaaaaggacaaaagcgaagagctgaataaagacattatgaagctgtattttaac
ggcggaaagaaaaagaaaatcagagccgttgattttgtaggaacgattgccaaaattgac
ggtgtgtcagctgacgacatcggcatcatcacgatcatggataacgcctcatacgttgag
attttaaatggtaaaggccctcatgttctcaaagtgatgaagaacacaaccgtcaaaggg
aaacagctgaaggtgaataaagcgaataaatga

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