Bacillus subtilis QB928: B657_39110
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Entry
B657_39110 CDS
T02292
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
bsq
Bacillus subtilis QB928
Pathway
bsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B657_39110 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsq03019
]
B657_39110 (deaD)
03009 Ribosome biogenesis [BR:
bsq03009
]
B657_39110 (deaD)
Enzymes [BR:
bsq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
B657_39110 (deaD)
Messenger RNA biogenesis [BR:
bsq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B657_39110 (deaD)
Ribosome biogenesis [BR:
bsq03009
]
Prokaryotic type
rRNA helicases
B657_39110 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFQ59763
LinkDB
All DBs
Position
complement(3947218..3948690)
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AA seq
490 aa
AA seq
DB search
MRTSARDRSLYMSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTG
SGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSS
FDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAII
KHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFS
LLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRG
EYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEK
RFLADIEEYIGFEIQKIEAPSQEEVARKKPEFLAKLNDRPESKKDKSEELNKDIMKLYFN
GGKKKKIRAVDFVGTIAKIDGVSADDIGIITIMDNASYVEILNGKGPHVLKVMKNTTVKG
KQLKVNKANK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagaacatctgcaagagacaggagtttatacatgagtcattttaaaaactatcaaatc
agtcatgacattttacgagcattggaaggactgggatatacagaaccgaccaaggtgcag
cagagtgtgatccccgctgcccttgaacgaaaggatcttgtcgtcaaatcacagacagga
agcgggaaaacggcttcgttcgggattcctctctgtgagctggcgaattgggatgaaaac
aagccgcaggcgcttattttaacaccgacccgtgagcttgcggtgcaagtaaaggaagat
atcacgaacatcggacgatttaaacggatcaaagcgacagccgtatttggaaaatcctcc
tttgataaacaaaaagctgagcttaagcaaaaaagccacattgttgtcggcacgccggga
cgtgttctggatcatatcgaaaaaggcacgctgccgttggatcgtctctcttatttggtc
attgatgaagcggatgagatgctgaatatgggcttcattgagcaggtggaggcgattatc
aagcatctgccgactgagcgtacgacgatgctgttttcagcgacgcttccgcaggatatc
gagaagctgagccgtcaatatatgcaaaaccccgagcatatcgaggtcaaagcggccggc
ctaaccacaagaaatattgaacatgcggtgattcaagtaagagaagagaataagttttca
ttgctgaaagatgtgctgatgacggagaatcccgacagctgcatcattttctgccgaacg
aaggagcacgtcaatcagctgaccgatgaattggatgacttgggatatccatgcgataaa
attcacggcggaatgattcaggaagaccgattcgacgtcatgaatgaatttaaacgtggc
gagtaccgttacttagtggcgacggatgtcgccgcgcgcgggattgatattgaaaatatc
tcccttgtcatcaactatgatctgccgcttgaaaaagaaagctatgtccaccgcacgggc
cgaacgggacgcgcagggaacaaaggaaaggccatttcgtttgtcacggccttcgaaaaa
cggtttttagccgacattgaagaatatatcggatttgaaatccaaaaaatagaagcacct
tctcaagaggaagtggcaaggaagaaaccagaatttctagctaaactgaatgaccgtccg
gaaagcaaaaaggacaaaagcgaagagctgaataaagacattatgaagctgtattttaac
ggcggaaagaaaaagaaaatcagagccgttgattttgtaggaacgattgccaaaattgac
ggtgtgtcagctgacgacatcggcatcatcacgatcatggataacgcctcatacgttgag
attttaaatggtaaaggccctcatgttctcaaagtgatgaagaacacaaccgtcaaaggg
aaacagctgaaggtgaataaagcgaataaatga
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