Brevundimonas staleyi: ACETK8_11280
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Entry
ACETK8_11280 CDS
T10734
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bsta Brevundimonas staleyi
Pathway
bsta02024
Quorum sensing
bsta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETK8_11280 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACETK8_11280 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsta03019
]
ACETK8_11280 (hfq)
03036 Chromosome and associated proteins [BR:
bsta03036
]
ACETK8_11280 (hfq)
Messenger RNA biogenesis [BR:
bsta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACETK8_11280 (hfq)
Chromosome and associated proteins [BR:
bsta03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ACETK8_11280 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
XGJ06663
LinkDB
All DBs
Position
2226460..2226705
Genome browser
AA seq
81 aa
AA seq
DB search
MSQDKRQNLQDTFLNSVRKTKTPLTIFLVNGVKLQGIVTWFDNFCVLLRRDGQSQLVYKH
AISTIMPSAPVQLYEPDADED
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagacaagcgtcagaaccttcaggacaccttcctcaactccgtccgcaagacc
aagaccccgctgaccatcttcctggtgaacggcgtcaagctgcagggcatcgtgacctgg
ttcgacaacttctgtgtgctgctccgtcgcgacggccagtctcagctcgtctacaagcac
gccatctcgacgatcatgccgtcggctcccgtgcaactgtacgagcccgacgccgacgag
gattga
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