Bacteroides stercoris: K6V31_13665
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Entry
K6V31_13665 CDS
T07883
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bste
Bacteroides stercoris
Pathway
bste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V31_13665 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bste03019
]
K6V31_13665 (recQ)
03400 DNA repair and recombination proteins [BR:
bste03400
]
K6V31_13665 (recQ)
Enzymes [BR:
bste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6V31_13665 (recQ)
Messenger RNA biogenesis [BR:
bste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V31_13665 (recQ)
DNA repair and recombination proteins [BR:
bste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V31_13665 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HHH
HTH_40
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UBE40845
LinkDB
All DBs
Position
3222900..3225083
Genome browser
AA seq
727 aa
AA seq
DB search
MAGKKINLTDQLKNYFGFDTFKGNQEAIIQNLLAGNDTFVLMPTGGGKSLCYQLPSLLMD
GTAIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSLNKSAIDQVKSDILAGRTKLLYVA
PESLTKEENVEFLKTVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTA
TATPKVQHDIQKNLGMVEAQVFKSSFNRPNLYYEVRPKTANVDKDIIKFIKNNPEKSGII
YCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGID
KPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE
IGKQLLLETAAYAESSVCRRKTLLHYFGEEYTEENCGNCDNCLNPKKQVEAQELLCTVIE
TVLAVKENFKADYIIDIIQGKETSEVQAHLHEDLEVFGSGMGEEDKTWNAVIRQALIAGY
LTKEVENYGLLKVTDAGKKFLKHPKSFKITEDNDFEEVEEEAPARGGGACAVDPALYSML
KDLRKKLSKKLEVPPYVIFQDPSLEAMATIYPITLDELQNIPGVGAGKAKRYGEEFCKLI
KRHCEENEIERPEDLRVRTVANKSKMKVAIIQAIDRKVALDDIAMSKGIEFEELLDEIEA
IVYSGTKLNIDYFLEDIMDEDHLLDIYDYFKESTTDNIDDALDELGDDFTEEEVRLVRIK
FISEMAN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaagaagattaatttgacagaccagctgaagaactacttcgggttcgacact
tttaaaggaaatcaggaagcaatcatacagaatctgttggcgggtaacgatactttcgtg
ttgatgcccaccggcggtggaaagtctttgtgctatcagttaccctctttgttgatggac
ggcacggccattgtgatttctcctctgattgccctgatgaagaatcaggtcgatgcgatg
cgtaatttcagcgaggaggatggaatagctcatttcatcaattcttcccttaacaagagt
gcgatagaccaggtgaagtccgatatccttgccgggcggacgaagctgctgtatgtagct
ccggagtctttgacaaaagaagagaacgtggagttcctgaaaacggttaagatttctttc
tatgccgtagatgaggcccattgtatttctgaatggggacatgacttccgaccggaatat
cgccgtatccgtcctattatcaatgaaatcgggaaagctccgctcattgcattgactgca
accgccacaccgaaggtgcagcacgatatccaaaagaatctgggtatggtggaagcgcag
gtgttcaagtcgtctttcaatcgtccgaacctttattatgaggtacgtcccaagactgca
aacgtagataaggatattatcaagttcatcaagaacaatccggaaaagtcgggtatcatc
tattgcctgagccggaagaaagtagaggaacttgccgagatacttcaggcaaacgggatt
aatgcccgtgcctatcatgccggaatggattcggccacacgaacacagaatcaggatgat
ttccttatggaaaaaatcgatgtgatcgtggccacgattgctttcggtatgggtattgac
aaaccggatgtgcgttatgtgattcactatgatattccgaaaagcctggaggggtattat
caggaaaccggacgtgccggaagagatggaggcgaaggacagtgtattactttttatacc
aataaagacctgcagaaactggaaaagtttatgcaaggcaagcctgttgcagagcaggaa
ataggcaagcagcttctgctggaaaccgctgcgtatgccgaatcgtccgtttgccgccga
aaaacgttgctacactatttcggtgaggaatatacggaagaaaattgtggaaattgtgac
aactgtttaaatccgaaaaaacaagtggaagctcaggaattattgtgcaccgtaatagaa
actgttcttgcggtaaaagaaaattttaaagcagactatattatagatattatacaggga
aaagaaacttcggaagtgcaggcgcatctgcatgaagatttggaagtgttcggttccggt
atgggagaagaagacaaaacttggaatgctgttatccgccaggcattgattgccggttat
ttgaccaaagaagtcgaaaactacggcttgttgaaagtaacggatgcaggtaagaaattc
ttgaagcatcctaaatcctttaagattacggaagataatgatttcgaggaagtggaggaa
gaagcaccggcacgcggcggtggcgcctgtgcggtagacccggctctctattccatgttg
aaagacttgcgtaagaagctctccaagaagttggaagtaccgccttatgttatattccag
gacccttctttggaagcaatggcaactatttatccgataactttggatgagttgcagaat
attccgggggtaggagccggcaaggcgaagcgttatggtgaagagttttgtaagctgatt
aaacgccattgtgaggaaaacgagatagaacgtccggaagatttgcgtgtacgtaccgtg
gccaataagtctaagatgaaggtcgctatcattcaggctattgaccgcaaggtggctttg
gacgatatcgccatgtcaaaaggtattgagtttgaggagttgctggatgagatagaagct
attgtctactccggtacgaaactgaatatcgactacttcctggaagatattatggatgaa
gaccatctgttggatatatacgactatttcaaagaatctactacggataatatcgatgat
gctctggatgagctgggagatgattttacagaagaagaagtacgtttggtacgtattaag
ttcatctccgaaatggcaaattaa
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