KEGG   Bacillus stercoris: QI003_09360
Entry
QI003_09360       CDS       T09305                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bstr  Bacillus stercoris
Pathway
bstr02024  Quorum sensing
bstr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bstr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QI003_09360 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QI003_09360 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bstr03019]
    QI003_09360 (hfq)
   03036 Chromosome and associated proteins [BR:bstr03036]
    QI003_09360 (hfq)
Messenger RNA biogenesis [BR:bstr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     QI003_09360 (hfq)
Chromosome and associated proteins [BR:bstr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QI003_09360 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: WGV97214
LinkDB
Position
1886223..1886444
AA seq 73 aa
MKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAIS
TFAPQKNVQLELE
NT seq 222 nt   +upstreamnt  +downstreamnt
atgaaaccgattaatattcaggatcagtttttgaatcaaatccggaaagaaaatacgtat
gtcactgtttttttgctgaacggctttcagttgcggggccaggtaaaaggctttgataac
tttaccgttttgctggaatcggaaggtaagcagcagcttatatataaacatgcgatctca
acgtttgcgccgcaaaaaaacgtccagcttgaactcgaatag

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