Bacillus subtilis subsp. subtilis 168: BSU06610 Help Entry BSU06610          CDS       T00010                                  Symbol pcrA Name (RefSeq) ATP-dependent DNA helicase PcrA   KO K03657   ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] Organism bsu  Bacillus subtilis subsp. subtilis 168 Pathway bsu03420   Nucleotide excision repair bsu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bsu00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     BSU06610 (pcrA)    03430 Mismatch repair     BSU06610 (pcrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bsu03400]     BSU06610 (pcrA) Enzymes [BR:bsu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      BSU06610 (pcrA) DNA repair and recombination proteins [BR:bsu03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      BSU06610 (pcrA)    MMR (mismatch excision repair)     Other MMR factors      BSU06610 (pcrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII Terminase_6N Com_YlbF Motif Other DBs NCBI-GeneID:  938747 NCBI-ProteinID:  NP_388543 Pasteur:  BG12834 BSORF:  BG12834 UniProt:  O34580 A0A6M4JKU6 LinkDB All DBs Position 719370..721589 Genome browser AA seq 739 aa AA seqDB search MNYISNQLLSGLNPVQQEAVKTTDGPLLLMAGAGSGKTRVLTHRIAYLMAEKHVAPWNIL AITFTNKAAREMKERVESILGPGADDIWISTFHSMCVRILRRDIDRIGINRNFSILDTAD QLSVIKGILKERNLDPKKFDPRSILGTISSAKNELTEPEEFSKVAGGYYDQVVSDVYADY QKKLLKNQSLDFDDLIMTTIKLFDRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKQLA ERFQNLCVVGDSDQSIYRWRGADITNILSFEKDYPNASVILLEQNYRSTKRILRAANEVI KNNSNRKPKNLWTENDEGIKISYYRGDNEFGEGQFVAGKIHQLHSTGKRKLSDIAILYRT NAQSRVIEETLLKAGLNYNIVGGTKFYDRKEIKDILAYLRLVSNPDDDISFTRIVNVPKR GVGATSLEKIASYAAINGLSFFQAIQQVDFIGVSAKAANALDSFRQMIENLTNMQDYLSI TELTEEILDKTEYREMLKAEKSIEAQSRLENIDEFLSVTKNFEQKSEDKTLVAFLTDLAL IADIDQLDQKEEESGGKDAITLMTLHAAKGLEFPVVFLMGLEEGVFPHSRSLMEEAEMEE ERRLAYVGITRAEQELYLTNAKMRTLFGRTNMNPESRFIAEIPDDLLENLNEKKETRATS ARKMQPRRGPVSRPVSYASKTGGDTLNWAVGDKAGHKKWGTGTVVSVKGEGEGTELDIAF PSPVGVKRLLAAFAPIEKQ NT seq 2220 nt NT seq  +upstreamnt  +downstreamnt ttgaattatattagcaatcaattactaagcggtttaaaccccgttcagcaggaagcagtc aaaacaacggacgggcctcttttgctgatggcgggagcgggtagcggaaagacgcgtgtc ctgacccatagaattgcttatttaatggcagaaaagcatgtggcgccgtggaacattctg gcgatcacatttacaaataaagcggcacgcgaaatgaaagaacgtgtggaaagcatcctc ggacccggcgcggacgatatctggatctccacattccacagcatgtgcgtgcggatcttg cgcagagatatcgaccggattgggatcaaccgaaatttctccatccttgatacggctgac cagctttcagtgatcaaggggattttgaaggagcgcaatcttgatccgaagaagtttgac ccgagaagcatcctcggcacgatcagcagtgcaaaaaacgaattgaccgaaccggaggaa ttctctaaagttgctggcggctactacgatcaggtggtcagcgatgtatatgctgattat cagaagaagctattgaaaaaccagtcgctcgatttcgacgatttaattatgacgacgatt aaactgtttgacagagtgcctgaagtgcttgaattttatcagcgcaaattccagtacatc cacgttgatgagtatcaggatacgaacagggcacaatacatgctcgttaagcagcttgcc gagcgtttccagaacctttgcgttgtgggggattctgatcagtcaatctacagatggcgc ggcgcggatatcaccaacattctttcatttgaaaaagattatccgaatgcaagcgtgatt ttgctagaacaaaactatcgttcaacgaaacggattttgcgcgcggctaacgaggtcatt aaaaacaactctaaccgcaaaccgaaaaatttgtggacggaaaatgatgaaggcatcaag atttcctattatcgcggtgataatgagttcggtgaaggacagtttgtggccggcaaaatt catcagcttcacagcacaggcaagcggaagctgtcggatatcgccatattataccggaca aacgcgcagtcccgtgtgattgaggaaacgcttctcaaagcgggcttgaactataacatt gtcggcggcacaaagttctatgacagaaaagaaattaaagacattcttgcgtacctgcgc ctcgtatccaatccggatgacgatatcagtttcacgcgcattgtcaatgtgccgaagcgc ggagtcggcgcgacatcacttgaaaaaatcgcttcgtatgcggccataaacggcttgtcc tttttccaagcgattcagcaggttgattttatcggcgtcagtgccaaagcggcaaacgcg cttgacagctttagacagatgattgaaaacctgaccaatatgcaggattacttatccatt acagagctgacagaagaaattcttgataagacggaatacagagaaatgctgaaggctgag aaatcgatcgaagcccaaagccgtttagaaaatatcgacgagttcctgtctgttacgaaa aactttgaacagaaaagtgaagacaagacactcgttgcgttcctgacagacttggcattg atcgcagatattgatcagctcgatcagaaggaggaagagtcaggcggcaaggatgcgatc accctgatgacactgcacgccgcgaaaggactggagtttccggttgttttcttgatgggg cttgaagaaggcgtcttcccgcatagccgttcactcatggaggaagcggaaatggaagaa gaacgccgccttgcgtacgttgggattacaagggcggaacaggagctttatctgaccaat gctaaaatgcgcaccttgtttggccggacaaatatgaacccggaatctcgcttcattgct gaaataccggatgatttattggaaaacctaaatgagaaaaaagaaacaagagcgacgtct gcgagaaaaatgcagccgagacgcggccctgtttcacgcccggtatcctacgccagcaaa acaggcggcgacaccttgaactgggcagtcggagataaggcgggccataaaaaatgggga acaggaactgtcgtcagcgtgaaaggcgaaggagaagggacagagcttgatattgccttc ccgagccctgtcggcgtgaaacgcctgttagcagcatttgctcctattgaaaagcagtaa

Bacillus subtilis subsp. subtilis 168: BSU11820 Help Entry BSU11820          CDS       T00010                                  Symbol yjcD Name (RefSeq) ATP-dependent DNA helicase   KO K03657   ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] Organism bsu  Bacillus subtilis subsp. subtilis 168 Pathway bsu03420   Nucleotide excision repair bsu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bsu00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     BSU11820 (yjcD)    03430 Mismatch repair     BSU11820 (yjcD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bsu03400]     BSU11820 (yjcD) Enzymes [BR:bsu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      BSU11820 (yjcD) DNA repair and recombination proteins [BR:bsu03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      BSU11820 (yjcD)    MMR (mismatch excision repair)     Other MMR factors      BSU11820 (yjcD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 AAA_14 ResIII Motif Other DBs NCBI-GeneID:  939813 NCBI-ProteinID:  NP_389064 Pasteur:  BG13157 BSORF:  BG13157 UniProt:  O31626 A0A6M3Z9J8 LinkDB All DBs Position complement(1253713..1255866) Genome browser AA seq 717 aa AA seqDB search MLRLNIADPPEFIHRQPGDFPACEEACEPKPSKEGKKEDDQESGVIRLPKGKAIAADPSP AVTEWHRPRSIKPGTPFVPKTIEPDTSLFPSVGLNTDQLKAVTETEGPLLVLAGAGSGKT RVLTARAAHMIEHLGIPPENMLLVTFTTKAVAEMKERMANQYGLQPAKVRRIVTGTFHSL FYKILYHSNSAKWNGEHLLKMEWQREQYIKKALYEEGIDEKESPVDQALQQIGFWKNTYV PNERIPLKDEWEKQVYRLYEHYERQKKEHSQFDFDDMASACYELFIERPDLLEQYQSRFT YILIDEFQDINPVQYKIMQMLASPEQNLCCVGDDDQSIYAFRGSNPSFILDFQKDYPGAK TIYLTANYRSTHPIVSSADIVVKKNKNRYAKTLEAARDDIQVPVLFYPYDEEEEATMVVS DIKEKIQNGASPEDFAVLYRTNSGGRAIYERLHQSSIPYTADRGVQSFYSRRIVRQILAY LYASQNEDDTEAIKHLLPALFLKQSALNTLKALSITEDCTMIKALAKLPDLKPFQLDKIK KIVPFFASLRTMKPVEAITFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRDIKVVAKKFKT IPDFLAHVDHMRAAEKNRTDEHGVQLMTIHRSKGLEFKTVYVLGTVDGSIPHDFSLETAR KGDEAALEEERRLLYVAMTRAKQHLYLSCPANRRGKTANRSRFLYPLLQKARQPLHH NT seq 2154 nt NT seq  +upstreamnt  +downstreamnt ttgttacggcttaacatcgccgatccgccagagtttatccatcgccagccaggcgatttt ccggcatgtgaggaggcgtgcgaaccgaagccctctaaagaggggaaaaaagaagatgat caggaatctggtgtcattcgtttacccaagggaaaagcgatcgccgctgacccgtcccca gctgttacagaatggcaccgtcctagaagcattaaaccaggaacaccatttgtgccaaaa acaatagaacccgatacgagcctttttccgtctgtcggtttaaacacggatcagctgaaa gctgtcacggaaacagagggcccgctcctcgtgcttgcaggtgcggggagcggaaaaaca cgggtactgacagcccgtgccgcccacatgatcgaacacttaggcataccgcctgaaaat atgctgcttgtcacctttacaacaaaagctgtcgctgaaatgaaagagcgtatggcgaac cagtacggattacagccggcaaaagtcagaagaattgtgacaggaacattccacagtctg ttttataagatcttgtatcactctaattctgctaaatggaacggtgagcatctgctgaaa atggagtggcagcgggaacaatatatcaaaaaagcactctatgaagaaggcatcgatgag aaagaatccccagttgaccaagccctgcagcagatcggtttttggaaaaacacttatgtc ccaaatgaacgcatccctctaaaagatgagtgggaaaaacaagtttatcgtttatatgaa cattatgaacgccagaaaaaagaacacagccaatttgattttgatgacatggcttcagcc tgctatgaattgtttatcgagcggcctgaccttctggaacaatatcaatctcggtttacg tatatcttaattgatgagtttcaggacattaatccggttcaatacaaaatcatgcaaatg ctcgccagcccggagcaaaacctgtgctgtgtcggagacgatgaccagtccatctacgcg tttcgcggaagcaatccgtctttcattcttgattttcaaaaggattatccgggagcgaag acgatctatttaactgcgaactacaggtctacgcacccgatcgtctctagtgctgatatc gttgtgaaaaagaacaaaaacagatatgccaaaacgcttgaagcggcccgcgatgacatt caggtccctgtgctgttttatccttatgatgaagaggaagaagccacaatggtcgtttcc gatatcaaagaaaaaattcaaaatggagccagtccagaagactttgcggttctttaccgc acaaacagcggaggccgtgctatatatgaaaggcttcatcaatcgtcaattccgtataca gctgaccgcggcgtccaatcgttttacagcagacggatcgtccgccagattctcgcctac ttgtacgccagccaaaatgaggatgacaccgaggcgattaaacacttgcttcccgccttg tttttaaaacagtccgctttgaatacgctgaaggcgctctcgattacagaggactgtacc atgatcaaagcgctggccaaattgcctgatctgaagccattccagctggacaaaatcaag aaaatcgtaccgttttttgcaagcctccgcacaatgaaacccgtagaagccatcaccttt gcagaaggaaaaatgggcttctccgagtatttaaaaaagcggggcaatgagggcaacaag ctggaaaaaggctctgatgacctgcgcgacatcaaggttgtcgccaagaagttcaaaacg attcctgactttcttgcccacgtagaccatatgagggccgctgagaaaaacagaacggat gaacatggcgttcagctgatgaccattcaccggtcaaaaggccttgaattcaaaacagtc tacgtgttaggcactgtagatggctcgattccgcacgatttctcattagaaacggcaaga aaaggagacgaggccgctcttgaggaggaaagacgccttttatatgtagccatgacccgg gcgaaacagcatttatatttgtcttgccctgctaacaggcgcggcaaaacagccaaccgc tcaagatttttgtatcccctgctacagaaagcaagacagcccttgcatcattaa

Bacillus subtilis subsp. subtilis 168: BSU33450 Help Entry BSU33450          CDS       T00010                                  Symbol helD Name (RefSeq) helicase IV   KO K03657   ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] Organism bsu  Bacillus subtilis subsp. subtilis 168 Pathway bsu03420   Nucleotide excision repair bsu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bsu00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     BSU33450 (helD)    03430 Mismatch repair     BSU33450 (helD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bsu03400]     BSU33450 (helD) Enzymes [BR:bsu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      BSU33450 (helD) DNA repair and recombination proteins [BR:bsu03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      BSU33450 (helD)    MMR (mismatch excision repair)     Other MMR factors      BSU33450 (helD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrD-helicase AAA_19 UvrD_C_2 UvrD_C AAA_30 DUF2075 Viral_helicase1 PhoH DEAD AAA_16 ResIII NACHT Motif Other DBs NCBI-GeneID:  936037 NCBI-ProteinID:  NP_391225 Pasteur:  BG14101 BSORF:  BG14101 UniProt:  O32215 A0A6M4JP70 Structure PDB LinkDB All DBs Position complement(3434327..3436651) Genome browser AA seq 774 aa AA seqDB search MNQQDKEWKEEQSRIDEVLKELEKKERFLETSAGGLKHDIIGLRKSFWEDVKVNFDDAHE AIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIENGEEQAERIYIG LASCLDEKEEHFLIYDWRAPISSLYYNYSPGKAEYEVPGETIEGEMVLKRQFMIKNGTLK AMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKILIVQGAAGSGKT SAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENMEQATFQEYIEHR LGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYVTRLSSEGMIFK NIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKKERRKDWVVHEA ELLDKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLKQAVRLLAFLDV TQLYLQLFSGWGGKFQHEKMDAIGELTRSAFTDNKLLYEDAAPFLYMQDLIEGRKKNTKI KHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTINGDQRMDACFEDEPAEY VRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMPLVVKTEGHESLCQKLAQEIGRLK KKGHETIAVICKTAHQCIQAHAHMSEYTDVRLIHKENQPFQKGVCVIPVYLAKGIEFDAV LVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEASPFVTAVPPHLYQIAE NT seq 2325 nt NT seq  +upstreamnt  +downstreamnt atgaatcagcaggataaggaatggaaggaagagcagtcgagaatagatgaggtgctgaag gagctcgaaaaaaaagagcggtttctggaaacgtctgcgggcgggttgaagcatgatatc atcggattaagaaaaagcttttgggaggatgttaaggttaattttgatgatgcccatgaa gcgattgaaacgatggctagcattaagcagcaggcagagctgctgtctgatcgggaacac aatcatcggcgcatggatcagcagctcaaacgaattcatcaattgaaaaaatcgccttat ttcggccggattgattttattgaaaacggcgaggagcaggcagagcgaatttatatcggt ttagcttcctgtttggatgagaaggaggaacactttctgatctatgactggagggcgccg atatcaagtttgtactacaattattccccaggaaaagcggagtacgaggtgcccggtgaa acgatagaaggggaaatggtgctgaaacgccagtttatgatcaaaaacggcactctcaag gcgatgtttaataccgatatgacgattggcgatgaaatgctgcaagaggtattaagccat cactctgatacccaaatgaaaaacatcgtgtctacgattcagaaagaacaaaatcagatt atccgtaatgaaaaaagcaagatcctgatcgtgcagggagcggctggcagcgggaaaaca tcggctgcgcttcagcgtgtcgcttatttgttatacaggcaccgcggtgtcattgatgcc ggacaaatcgttttgttttcacccaacttcttatttaacagctatgtctcctctgttttg ccggagttaggagaagagaatatggagcaggcgacgtttcaggaatatatcgagcatcgt cttggccgcaagttcaaatgtgaaagcccctttgatcagctcgaatattgcctgaccgaa acaaagggaggcgattttccaacaaggcttgcaggaatcacatggaaggcgggtttatcc tttcagcaattcattaatgaatacgtcacacggctttcctctgaagggatgatttttaaa aatattatattccgcggacaaaagctgatcacaaaggagcaaattcaatcctatttttac tcattggatcaaaatcactccattccgaatcggatggagcaaaccgcgaagtggctgctg agtgagcttaacaagcttgagaaaaaggaacggcgaaaggattgggttgttcatgaagct gagctgcttgacaaagaggactacttggacgtgtacaaaaaactgcaggaaaggaaacgg ttcagcgagagtacgtttaacgattatcaaagagagcagcagctgcttgccgccatcatt gtgaaaaaagctttcaaaccgctcaaacaggcagtcaggctccttgcatttcttgatgtt acacaactttatttgcaattgttttctggctggggaggaaaatttcaacatgagaagatg gatgcgataggtgagctgacccgttcggcatttacggataataaattgctctatgaggac gcggcaccgtttctttatatgcaggatctgattgagggcagaaagaaaaatacgaaaatc aaacatctatttattgacgaagcccaggactattcaccgtttcagatggcttacatgaga agcatttttccggctgccagcatgacagtgctcggtgatatcaatcagtccatctacgcg cataccataaacggggatcagcgtatggatgcgtgctttgaggatgagcctgctgagtat gttcgtttaaagagaacatacagatcaacaaggcagattgtcgagtttaccaaagcgatg cttcaagatggagcggatattgagccgtttaatagaagcggggaaatgccgctcgttgtc aaaactgaaggacatgagagcctttgccaaaagctcgcgcaagaaattggccggctcaag aaaaaagggcacgaaacaatagccgtcatctgcaagactgcgcatcaatgcatacaggcg cacgcccacatgagtgaatatacagatgttcgcctgattcataaagaaaatcaaccattt caaaagggtgtttgcgtgattccggtgtatttagcgaagggaattgaatttgacgcagtg cttgtctatgatgcatctgaagaacactatcatacagagcacgaccgcaggcttttatat actgcgtgcacccgtgcgatgcacatgctggcggtattttatacaggtgaagccagtccg tttgtaaccgctgtgccgcctcacttatatcagattgctgaatga

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