Bifidobacterium subtile: BS3272_01335
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Entry
BS3272_01335 CDS
T07068
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bsue
Bifidobacterium subtile
Pathway
bsue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BS3272_01335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsue03021
]
BS3272_01335
03400 DNA repair and recombination proteins [BR:
bsue03400
]
BS3272_01335
Enzymes [BR:
bsue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BS3272_01335
Transcription machinery [BR:
bsue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BS3272_01335
DNA repair and recombination proteins [BR:
bsue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BS3272_01335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QOL36675
LinkDB
All DBs
Position
282928..283923
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESLNPQRSRFVIEPLEPGFGYTLGNSLRRTILSSIPGAAVTSVRISGAL
HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEALAGDITPPAGVTIAN
PDMHIASLAEDGELEIEFTVERGRGYVQAQMNKSDSDEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEIGPAPVA
EESNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVEEK
LQTLGLSLKASPLGFDTNNLEGGTFFSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgtccgacattaactgaggaatcactgaatccgcagcgttcccgc
tttgtcatcgagccgcttgagcctggcttcggttatacgctcggcaattcgctgcgtcgc
acgatcctgagctccatccctggagccgctgtgacttcggtgcgcatctccggtgccctg
cacgagttcaccactctgcctggcgtcgaggaggatgtgaccgagatcctgctgaacatc
aagggcatcgtgctcacgagcgaatacgacgagccggttgtcatgtatctgcgcaagagc
ggcaagggtgaagcgctcgcgggggacatcacccctccggccggcgtcaccatcgccaat
cccgatatgcacatcgcatcgcttgcggaagacggggagctcgaaatcgagttcaccgtc
gagcgcggccgcggctacgtgcaggcgcagatgaacaagtcggatagcgacgagatcggc
cgtattccggtcgattcgatttattccccggtgctcaaggtgagctacaaggtcgaggcc
acacgcgtggaacagcgcacggactttgacaagctcatcctcgacgtggaaaccaagccg
gctatctcgcctcgcgatgccgtggcatccgcaggctcgacgctggtggagctcttcggc
ctgtgccgcgagctcaacacgcaggcggagggcgtcgaaatcggccccgcaccggttgcc
gaagagtcgaatccggagatggccgtgccgatcgaggatctcaacctcacgcagcgcagc
tacaactgcctcaagcgcgaagggatccacaccatcggcgagctggtcgcccacacggag
caggatctgctggacatccgcaatttcggtatgaaatcgatcgatgaggtcgaggagaag
ctgcagacgctcggtctgtcgctcaaggcctcgccgttgggattcgataccaacaacctt
gaagggggcacgttcttctcgccggaagacgagtga
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