Basfia succiniciproducens: A4G13_05055
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Entry
A4G13_05055 CDS
T06488
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bsun
Basfia succiniciproducens
Pathway
bsun02024
Quorum sensing
bsun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G13_05055
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4G13_05055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsun03019
]
A4G13_05055
03036 Chromosome and associated proteins [BR:
bsun03036
]
A4G13_05055
Messenger RNA biogenesis [BR:
bsun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A4G13_05055
Chromosome and associated proteins [BR:
bsun03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
A4G13_05055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QIM68799
LinkDB
All DBs
Position
1137611..1137901
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AA seq
96 aa
AA seq
DB search
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARSVSHHNNPQQQQQHSQQTESAALAAEPQAE
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggacaatcattacaagatccttatttaaacgcattacgacgcgaacgtatt
cccgtttctatttatttagtaaacggaattaaattgcaaggtcaaatcgaatcattcgac
caatttgtgattttattaaaaaataccgtaaatcagatggtttataaacacgcaatttca
actgttgttccggctcgttcggtttctcatcataacaaccctcaacagcaacaacagcac
agtcaacagacagaatcggccgcacttgccgccgaacctcaagcagaataa
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