Bradyrhizobium symbiodeficiens: CIT39_30720
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Entry
CIT39_30720 CDS
T06284
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_30720 (addA)
Enzymes [BR:
bsym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIT39_30720 (addA)
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CIT39_30720 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AWM10384
LinkDB
All DBs
Position
93180..96689
Genome browser
AA seq
1169 aa
AA seq
DB search
MVKLPRPIPDEVRARQARASDPTASAFVSANAGSGKTHVLVQRVIRLLLSGVPPEKILCI
TFTKAAAANMAERVFTTLGHWVTLDDTGLEAAIRAVGIPHPSAKIRRDARKLFACALETP
GGLKVQTIHALCTRLLQQFPFEANVPARFAVIDERDQTDMMERANLKVLLEAARAPDSVT
GRALLTAMASAADVTFKEVVREACLSRDHFMAWTDEAGNAEAAAAQMAAALGVDASDRIE
DVETDILDGPYLPRSRWEDIAFALEDGSKSDNDQASRLREAKVFSGSAQVDAYLCVFLTD
EKLPRKAVLTKKFGEHNPSVARLFENEAQRLAGLIEKRRAVTMRDRTAALLHIATAAAAN
YRREKQERGLLDYDDLIDKTLAMLNRVSSGWVHYKLDRGVDHVLIDEAQDTSPRQWDIVA
HIISEFTAGEGARDGLNRTVFAVGDEKQSIFSFQGADPHEFDKRKRELDRKFRAAGLKFD
PVAFTYSFRSGAAILHSVDHVFREPTIYKSIHSIDVGHPLHNSLSDAGPSVVELWDLAEA
DDRQDIEGWRAPFDGVAVTSPEVKLARRIQTEIKRLVESGTLTGHEGERRPLRYGDMLIL
VRRRGNAFDAVIQALKHAGVPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALAVALK
SPLFGLDDDDLFQLAHERKGSLRRALGEHAAGSEKFASVLRRLEACETRAREETPFAFYA
WLLGGDGGRARILRRLGHEANDALDEFLELALSCERKAPASLQGFMAWLRSADTEVKRDM
EISRDEVRVMTVHGAKGLEASVVFMVDTTSSPADSQRVWLIHVPRGNGGEVVVWAGRKAD
DPKPVADARKAMLEETEDEYRRLLYVAMTRAADRLIVGGCMPGNMKTVRKLSWYDLVDTG
LKGSGLDKQVIETPLGKVTRFARPEDVAVQGIPAAIVDQAVALPAWLRTPAPSETVDDDL
VRPSGQSAEDGRSVRTGESVQSRALALQRGTLVHRLLQSLPDIAAERRREAALGFMTRNA
ADWPEADRAALADKVLALITEPRFAPVFAAGSRAEVAIAGRLERPGRAPALVSGQIDRLV
VRPDEVLIVDFKTNQAAPKSAAEAPAAYVRQLALYRAVLARLYPQKPVRAVLLWTEALEY
MEISAPALDAALASLHLAVSVLDPARGRS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgccacgccccattcctgacgaggtgcgcgcgcggcaggcgcgtgcatcc
gatccgactgcgtcggcgtttgtgtccgccaatgccggctcgggcaagacgcatgtgctg
gtgcagcgggtgatccgcctgctgctatcgggcgtgccgccggaaaagatcctctgcatc
accttcaccaaggcggccgccgccaacatggccgagcgcgtgttcaccacgctgggacat
tgggtgacgctggacgataccgggctcgaagcagcgatccgcgcagtcggcatcccgcat
cccagcgcgaaaattcgccgtgacgcgcgaaaactgttcgcctgcgcgctggaaacaccg
ggcgggctgaaggtgcagaccatccacgcactgtgcacgcgcctgctgcagcagtttccg
ttcgaggccaacgtgcccgcgcgctttgccgtgatcgacgagcgcgaccagaccgacatg
atggagcgcgccaatctgaaggtgctgctggaggccgcgcgcgctcccgacagcgtcacc
ggccgcgccttgctgaccgcgatggcgagcgccgccgacgtcaccttcaaggaggtcgtg
cgcgaagcctgtctcagccgcgatcatttcatggcctggacggatgaggccggcaacgcc
gaagcggctgctgcgcagatggcggcggcgctgggcgttgatgcgagcgaccgcatcgag
gacgtcgagacggacattctcgatggtccctacctgccgcgctcgcgctgggaggacatc
gcctttgcgctggaggacggcagcaagtcggacaatgatcaggcctcccgccttcgcgag
gccaaggtcttttccggcagtgcgcaggtcgatgcctatctctgcgttttccttaccgac
gaaaagctgccgcgcaaggccgttctgaccaagaagtttggcgagcacaacccgtccgtc
gcccgcctgttcgagaacgaggcgcagcgcctcgccggattgatcgagaagcgccgcgcc
gtgaccatgcgcgaccgcaccgcggcgctgctgcacatcgcgaccgcggcggctgcgaac
tatcgccgcgagaagcaagagcgcggcctgctggactacgatgacctcatcgacaagacg
ctggcgatgctgaaccgtgtgtcttcaggctgggtgcattacaagctcgaccgcggcgtc
gatcacgtcctgatcgacgaagctcaggacaccagcccgcggcaatgggacatcgtcgcg
cacatcatctccgaattcacggccggcgaaggcgcgcgcgacgggctgaaccgcaccgtc
ttcgcggtcggcgacgagaaacagtcgatcttctcgttccagggcgctgacccgcacgaa
ttcgacaaacgtaagcgagaactggatcgcaaattcagggctgccgggctgaagttcgac
cccgtcgccttcacctactcgttccgttcgggtgctgcgatcctgcattcggtcgaccac
gtcttccgcgaacccacgatctacaagagcattcattcgatcgacgtcggccatcccttg
cacaactcgctcagcgatgctggtccaagcgtcgtcgagctctgggatctcgcggaagcc
gacgatcggcaggacatcgagggctggcgcgcgccgttcgacggtgttgcggtcaccagc
cccgaggtcaagctcgcccgccgcatccagaccgagatcaagcggttggtcgagagcggc
accctgaccgggcatgagggcgagcgccggccgctgcgttacggcgacatgctgatcctg
gtgcgacggcgcggcaatgcgttcgacgcggtgatccaggcgctgaagcatgctggcgtt
cccgtggccggcgccgaccggctcaagttgaccgagcatatcgcgatcatcgacctgatg
aatcttgcggacgcactgctgctgccgcaggacgatctcgcgctggcggtcgcgctgaag
agcccgctgttcggcctcgatgacgacgacctgtttcaattggcccatgagcgcaagggc
tcgctgcgccgcgcactcggcgagcatgcggccgggagcgagaagttcgcttccgtgctg
cggcgtctggaggcctgcgagacccgtgcgcgcgaggagacgccgttcgccttctacgcc
tggctgttggggggcgacggcgggcgtgcacgcatcctgcgacggctcggccatgaggcc
aacgacgcactcgacgaattcctcgaactggcgctcagctgtgagcgcaaggcgccggcc
tcgctgcaaggcttcatggcctggctgcgctcggccgacaccgaggtgaagcgcgacatg
gaaatctcgcgcgacgaggtgcgggtgatgaccgtgcacggcgccaaggggctggaagct
tcggtcgtgttcatggtcgacaccacgtcgtcgccggcggattcgcagcgggtctggctg
atccacgtgccgcgcggcaatggcggcgaggtcgtggtctgggccggccgcaaggccgac
gaccccaagcccgtcgccgacgcgcgcaaggccatgctcgaggagaccgaggacgaatat
cgccgtctgctctacgtcgcgatgacacgtgcggccgaccgcctgatcgtcggcggctgc
atgcccggcaacatgaagacggttcgcaagctgagctggtacgatttggtcgacaccggg
ctcaaaggctcgggcctggacaagcaggtgatcgagacgccgctcggcaaggtgacccga
ttcgcccggccggaggatgtcgccgtgcagggtatcccggcggcgattgtggatcaggcg
gtcgcgctgccggcgtggctgcgaacaccggcgccgagcgagaccgttgacgacgatctg
gtgcgtccctccggtcagtcggccgaggatggccgcagcgtgcggacaggcgaatcagtg
cagtcgcgcgctctcgcgttgcaacgcggcacgctggtgcaccgtctgctgcaatccttg
cccgatatcgccgcggaacgccggcgcgaggccgcgctcggcttcatgacgcgcaacgcc
gcggactggccggaagccgatcgcgccgctttggccgacaaggtactggccttgatcacc
gaaccgcgctttgcgccggtctttgccgccggcagccgggcggaggtcgccatcgccggc
cggctggagcggccgggccgggcaccggcgctggtgtcggggcagatcgaccgactggtc
gtccgtccggatgaggttttgatcgtcgatttcaagaccaaccaggccgcgcccaaaagc
gcggccgaggcgcccgcggcctacgtccggcagcttgcgctgtaccgggcggtgctggcg
cggctttatccccaaaagcctgtcagggccgtcctgctctggaccgaggcccttgaatat
atggagatttcagcccccgcgctggacgcggcgctggcatcccttcatctcgctgtgagc
gtccttgacccggcaaggggccgttcatag
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