Bemisia tabaci (sweet potato whitefly): 109040900
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Entry
109040900 CDS
T06019
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109040900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109040900
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109040900
mRNA degradation factors
5'-3' decay
Lsm complex
109040900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109040900
NCBI-ProteinID:
XP_018912551
UniProt:
A0A9P0ACT8
LinkDB
All DBs
Position
Unknown
AA seq
166 aa
AA seq
DB search
MSTGKENKDENSKSFTPSRIFKSRRDSHDDLPIEGWPMGTATLLTEIDKKMMVVLRDNRT
LIGYLRSIDQFGNLALHQTIERIYVGSKYGDIPRGIFIVRGENAVLLGELDQTRDVGLIE
QVSVEEILNAQRREQEAKQEKNKVLAKALRERGLSFVNDLVQEDQF
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtccactggtaaagaaaataaagatgagaacagtaaatctttcacaccatcaagaatt
ttcaaatctagacgagattctcatgatgatctacctatcgaaggatggccgatgggcacc
gcaactctccttactgaaatcgataaaaaaatgatggttgttcttagagataatagaacg
ttaattggatatctacgaagtatagaccaatttgggaacttggctctgcatcagacaatc
gagaggatatatgtcggaagcaaatacggcgacattccacgaggtatcttcatagtaagg
ggagagaatgcagtgcttctaggagaactggatcaaacacgagatgttggattgattgaa
caagtttctgttgaggaaattcttaatgcccagcgccgagaacaggaagcaaaacaggaa
aagaacaaggttcttgccaaagcacttcgtgaacgtggactgagttttgtcaatgatctg
gttcaggaagaccagttttaa
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