Budorcas taxicolor (takin): 128058571
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Entry
128058571 CDS
T08909
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04151
PI3K-Akt signaling pathway
btax04510
Focal adhesion
btax04512
ECM-receptor interaction
btax04820
Cytoskeleton in muscle cells
btax04974
Protein digestion and absorption
btax05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
128058571 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128058571 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128058571 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128058571 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
128058571 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
128058571 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
btax00535
]
128058571 (COL9A3)
Proteoglycans [BR:
btax00535
]
Extracellular matrix (ECM) proteoglycans
Others
128058571 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
128058571
NCBI-ProteinID:
XP_052507016
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Position
13:complement(54364105..54382441)
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AA seq
684 aa
AA seq
DB search
MAGAPTLALLLLGQLLAATINLTEAQKVGPRGPPGPQGPPGKPGKDGIDGEVGPPGLPGP
VGPKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPSGPPGLGGKGLP
GPPGEAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPP
GPPGPPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPPGIPGTVGLQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGIPGMSGPGGEP
GMPGKDGRDGVPGLDGEKGEAGRHGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEA
GPSGEPGVPGDVGMPGERGEAGHRGSAGALGPQGPPGAPGIRGFQGRKGSIGDPGLPGPQ
GLRGGVGDRGPGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQ
GPNGTSGVDGVPGPPGPVGLQGVRGMPGITGKPGVPGKEASEQHIRELCGGLVSEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGSAGEGLDGPDGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAVGAQGPPG
ICDTSACQGAVMAAVGEKSGPRSS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcccccaccctggccctgctgctgctggggcagctgctggccgccaccata
aacttgaccgaggcacagaaagtgggacctcgaggcccccctggtccccaagggccaccc
gggaagccaggcaaggatggcattgatggagaagttggtcctcctggtcttcctgggcct
gtgggaccaaaaggggccccagggaagccagggaagccaggggaggccgggctgcctgga
ctgcctggcgtggatggtctgaccgggcaggatggacctcctggacccaagggcgctccc
ggagaacggggaagtctgggaccctcagggccacctgggctggggggcaaaggcctccct
ggacctcctggagaggcaggggtgagcggcctcccaggtggaattggcctccggggcccc
ccgggaccctcaggactcccaggcctccctggccccccaggacctcctggcccccctggt
cacccaggggtgcttcccgaaggtgctactgatcttcagtgcccggccatctgcccgcca
gggcccccagggcccccaggaatgccagggttcaagggacccactggctacaaaggggag
cccggagaagtcggcaaggatggcgaaaagggtgaccccggcccccctggaccccctggt
atcccgggcaccgtggggttgcagggtccacggggcctacgaggacttccagggccactt
ggaccccccggggaccggggtcccattgggttccgagggccccccgggatcccaggagcc
cctgggaaagcgggcgacagaggagagaggggcccagaggggttccgcggccccaagggc
gaccttggcaggcctggtcctaaaggcatccccggcatgtctgggcctggtggagagccg
ggcatgccaggcaaggacggccgggatggcgtgccaggactcgatggcgagaagggagaa
gctggtcgccacggtgccccgggagagaaggggcccaacgggctaccgggtctccccgga
cgagcagggtccaagggtgagaaaggagaactgggcagacctggagagctgggcgaggcc
ggcccctcgggagagcctggtgtccctggagatgttggcatgcccggcgagcgtggagag
gctggacacaggggctcagcgggggcactgggcccgcaaggcccccccggggcccctggc
atccgtggcttccagggccggaagggcagcataggagaccccggcctgccgggcccccaa
ggcctccgaggtggcgtgggcgaccggggcccgggaggagctgctggccccaagggcgac
cagggcatcgcgggtgctgacggccttcctggggataaaggagaactgggtcccagcggc
cctgttggccccaaaggagagtccggcagtcgcggggagctgggccctaagggcatccag
ggccccaacggcaccagcggcgtagatggcgttcctggcccccctggccccgtgggcctc
cagggtgtgcgaggcatgcccggcatcactggaaaacctggggtcccggggaaagaagcc
agcgagcaacacatcagggagctgtgcggggggctggtcagtgaacaaattgcgcagctg
gccgcgcacctgaggaagcccctagcaccaggctccatcgggcgcccgggtcctgctggc
cccccgggccccccaggccccccaggctccattggtcaccccggggctcgagggccccct
ggataccgaggtcccacaggagagcttggagaccctggacccagaggaaaccagggtgac
agaggagacaaaggctcagctggcgagggcctggatgggcctgacggagaccaagggctg
caaggaccgcaaggcgtgcccggcatcagcaaagacggccgagatggggctcatggtgag
cctgggctccccggcgatcctggccttcctggtgccgtcggcgctcaggggcctcctggc
atctgcgacacctccgcctgccaaggagccgtgatggcagctgttggggagaagtcaggt
ccccggagctcctaa
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