Bombus terrestris (buff-tailed bumblebee): 100646889
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Entry
100646889 CDS
T04364
Name
(RefSeq) collagen alpha-3(IX) chain isoform X2
KO
K08131
collagen type IX alpha
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04512
ECM-receptor interaction
bter04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100646889
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100646889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bter00535
]
100646889
Proteoglycans [BR:
bter00535
]
Extracellular matrix (ECM) proteoglycans
Others
100646889
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
100646889
NCBI-ProteinID:
XP_020723886
UniProt:
A0A9B7D0K9
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Position
6:21723341..21748646
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AA seq
894 aa
AA seq
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MYFSIWIFVLVQFTRTKYTSGEETILNSPRGPCEGYKQGEDDLQTFDFISKLKLDLLETH
YTGVTRVRGSNRMQIAYRLEKDTDITQPTKVILPNGLPEEFSTACTFRARKLPKYTWHII
RIVDMENEPQFLIAMNPKIQTLDLSVKNQTGELETVSFSADRIFDKNWHKINVGVFKDRL
VVYIDCEYIDTQDLDPRGTIKVDGDISISKISHSKNVTVPIDIQWMVLNCDPTRPERETC
EELPKSLSSPLLPQRRPGCEIICPQGPPGINGTNGLPGLTGLPGPPGPIGEPGLPGQPGL
RGSPGEQGKVGPQGFTGARGFPGNPGPKGSIGQIGLPGAKGENGERGDMGFPGLKGDQGL
PGPQGYPGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGSKGEQGERGDEGKQGQKGEP
GERGFPGQDGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGALGPPGIQGQK
GEAGEPGRDGLPGSMVGSILPGPPGPEGPRGSPGEDGLPGVKGEPGPVGPPGLPGLQGKD
GAPGSLGPPGSQGSPGLPGEPGVPGPRGIEGAIGKPGLPGLDGRSAEKGDRGHQGEQGPV
GPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGPAGPPGTISDMLNTNNILETIGS
PGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGIPGKDGAPGLQGPPGIRGQTGMPGV
QGPPGRSIIESEIREICTSVLREQMTEMAAQMQGPPGPPGRGRPGRPGSPGPQGRPGDPG
LPGLPGERGFVGLPGPQGAIGPQGSPGERGEKGDKGQEGVGVEGPMGPRGPPGPPGNDGV
GLPGRQGERGEPGRPGIPGMRGPPGLHGLPGFCEFCNYPSATYLQYSRSDEKGP
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtacttctcaatatggatattcgtgcttgtgcaattcacacgtacgaaatatacatct
ggcgaggaaacaatcttaaattctcctcgtggaccatgcgagggatacaaacagggcgaa
gacgatcttcaaacattcgacttcatcagcaagttgaaactagatcttttggagacacat
tacactggcgtgacgcgagtcagaggtagcaatcgtatgcaaatcgcctaccgattggaa
aaagatacagacatcactcaaccaaccaaagttatactcccaaacggattgccagaggaa
ttcagcacggcttgcacatttagggccagaaaactgccaaagtatacttggcacattatc
agaatcgtcgacatggaaaacgagccccagtttttaatcgcaatgaacccaaaaattcag
actttggatttatccgtgaagaaccagacaggggaactggaaacggtgtcgttttcggcc
gatcgtatcttcgacaaaaattggcacaaaattaatgttggagtcttcaaggataggctg
gtggtgtatatagattgcgaatacattgacacacaagacttggatccacgaggaacaatc
aaagtggatggcgacatatcgatatcgaaaatatcacacagcaaaaatgttactgtaccg
atcgatattcagtggatggttttaaattgcgatcctacgaggccagagagagagacctgt
gaggaactgccgaagagccttagcagccctttattacctcagagaagacctggctgcgaa
attatctgtccacagggaccaccgggaattaatggcactaatggtttaccgggtttaacc
ggattacccggaccacctggacctattggagaacccggcttacctggacagccgggttta
cgcggatcacctggagagcaaggcaaagtaggaccacaaggattcactggtgcacgtgga
tttcccggaaatccaggtcctaaaggatctattgggcaaattggactacctggagcaaaa
ggagaaaatggcgaaagaggggacatgggatttccagggttgaaaggagaccaaggcctt
ccgggaccacaaggttatccaggtcctccaggtccaccaggaaagatcagtgactatcgt
gatgctataccaaaatttgtaggcccaccagggtctccgggatatccaggtcaaaagggt
tcgaagggtgaacaaggagaacgcggcgacgaagggaaacaaggtcaaaaaggtgagcca
ggagaacgaggttttccagggcaagacgggtctcctggttcagaaggaagatcagggctt
cctggctttcctggacctaaaggagaaataggattcccgggagtaccaggtcctcaggga
ttgcaaggtcttcgtggtgaagctggtgcactaggaccacctggaattcagggtcaaaaa
ggagaagctggagaaccaggtcgtgatggtttgccaggttcgatggtcggttccattcta
ccaggaccacctggtcctgaaggtccccgtggttcaccaggagaagatggtttaccagga
gtgaaaggagaacctggtcctgttggtccaccgggtctcccaggtttgcaaggaaaggat
ggcgctcctggttctctaggacccccaggatcacagggttcacccggtttacctggagaa
ccaggtgtcccaggtcctcgaggaatcgaaggtgctattggtaaaccaggactaccagga
ctcgatggacgatctgcagaaaaaggcgacagaggtcatcaaggagaacaaggtcctgtt
ggaccacgcggtttacctgggagtgttggtgcaccgggtttacctggagtcgctggtatt
ccaggattagaagggcggccaggtcctccaggtgccccaggtcctccaggaccagcagga
ccaccaggaacaatttcagacatgttaaatacaaataatatattggaaactatcggcagt
ccaggggttagtggaccaagaggtgcgtcaggtgctccaggattaccaggtgagagagga
cctcctggagaacgaggtccagagggtcaaatgggactaccgggaataccaggaaaagat
ggggctccaggacttcaaggaccgccagggattagagggcagacaggaatgccaggagtt
caaggaccgccaggccgaagtatcattgagtcagaaattcgagaaatatgtaccagtgtg
ttacgagaacagatgactgagatggcagcacagatgcaaggtccacctggtccacctggt
cgaggccgtccaggtcgtcctggatcacctggtccacaaggtcgcccaggtgatccaggt
ctcccaggtttacccggagagcgtggatttgtcggattaccaggaccacaaggcgccata
ggtcctcaaggttcacctggtgaacggggtgagaagggcgataaaggtcaggaaggcgtt
ggcgtagaaggtccaatgggtccgcgaggaccgcctggaccacctggtaatgatggcgtt
ggattgcctggaaggcaaggagaacggggggaaccaggcaggccaggcattcctgggatg
agggggccacctggacttcacggattacccggattttgcgaattctgtaattatccaagc
gccacttacttacagtattctcgcagcgatgagaaagggccctaa
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