Bombus terrestris (buff-tailed bumblebee): 100651056
Help
Entry
100651056 CDS
T04364
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
100651056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bter04040
]
100651056
Ion channels [BR:
bter04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100651056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
100651056
NCBI-ProteinID:
XP_003402180
UniProt:
A0A9B0F5L6
LinkDB
All DBs
Position
18:3955493..3971812
Genome browser
AA seq
1116 aa
AA seq
DB search
MNPSESQQNLLANEARAPSVQSLNPPSDYSLGPVEKHFLLSAERGDCATVKRLLEENKDH
PEILNINCVDPLNRSALIAAIENENVELIRLLLDLGIQVKDALLHAIKEEYVEAVEILLE
WEEKIHEPGQPYSWEAVDRSSSNFTPDITPLILAAHKNNYEILKILLDRGATLPTPHDAR
CGCDECVTSSEQDSLRHSQARINAYRALTSPSLIALSSRDPLLTAFELSWELRRLSHMEQ
EFRFEYNEMREQTQNFATALLDHARTSLELEVMLNYNPHGENWEPGERQTLDRLKLAIKY
KQKQFVAHPNVQQLLAAIWYDGLPGFRRKSMIGQFIEIGKLGAMFPVYSTIYMLSPTSPM
GLFMKKPFVKFICHSSSYAFFLMLLGMASQRIEYLVIELFGNAWMHEILAGWKRRERGCI
PGFVESGVIIYVISLVIGEMRSLWSDGLLEYISDLWNIVDFVQNMFYVIWLMLRVTAWIV
VQREYWNGLDPWYPRDQWHAFDPMLLSEGAFAAGMIFSFLKLVHIFSVNPHLGPLQISLG
RMIIDIIKFFFIYTLVLFAFGCGMNQLMWYYADLEKQKCYHMKDFPDLPDFDNQEKACSI
WRRFANLFETSQSLFWASFGMVDLMSFDLTGIKSFTRFWALLMFGSYSVINVIVLLNMLI
AMMSNSYQIISERADTEWKFARSHLWMSYFEDGDTVPPPFNMVPTGKTFSRIIKCGKTGR
QTRSLIKKSREKALARHDTVMRLLIRRYVTAEQRKRDEFGITEDDVMEIRQDISTLRYEL
IDILRQNGMRTPTLDKQDAALSGKKGRVMERRLQKDFQIGIVEGIVNAVIQSEKEPKDVF
SQIAKAIGRKSSGSKKKDWNAMVRKNTFVKDPIGSTTEATMKQTRRSIRRHLQTQNSDLA
SLDPNRLVDYNPNLLEVSPTTRIAYAKFMIGRARPVPEQKEEGESKNDVEGSQKSVRIVT
EPVHATPILKKTLLKSLSSGSLEKGGEKAVSIEVRAPSPIPEDPKEGEVGNSPQSKAGLA
KNPTDTKPLSEKEEGDRKNTEDEEKKKREEEEKRKKEMEEEKKKKEEEKKKDEGEKKKES
NSEPSKPAANEDNVPVATTKLRGKSKATGQIMGGWI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcagagtcgcagcagaatcttctcgcgaacgaggcgagagcgccatcggtg
caatctttaaacccgccctcggactacagtcttggcccagttgagaagcacttcctgctc
agcgcggaacgaggtgattgtgccactgtcaaaagactattggaagagaacaaggatcat
ccagagatcctcaacatcaactgcgtggatcctcttaaccgatccgctctgatcgccgcc
attgagaacgagaatgttgaactcatcagactacttctcgacttaggcattcaagtgaag
gatgcactcttacacgccataaaagaagagtacgtggaagctgtggagatccttctcgaa
tgggaggaaaaaatacacgagcctggtcaaccttacagttgggaagctgtagacagatca
tcgtcgaactttacaccagatataaccccactgattttggcagcacataagaacaattat
gaaattctaaaaatcctcctagatcgtggtgccacgcttcccactcctcacgatgccaga
tgtggttgcgacgagtgtgtgacatccagcgaacaggattctttgagacattctcaggcg
cgaataaacgcgtatcgcgcgcttacatcaccatctttaatcgccttatcatcgagagac
cctcttctgaccgctttcgaactctcctgggaacttcgtcgattgagtcatatggaacaa
gaatttcgtttcgagtataatgagatgcgggagcaaacacaaaattttgctacagccctg
ttggatcacgcacgtacctctctggaattggaggtaatgttgaattataatccgcatggc
gaaaattgggaacctggagaaagacaaaccctggatcgactcaagcttgctattaaatac
aaacagaaacagttcgtggctcacccaaatgttcaacaattactggctgctatctggtac
gacggtttgcctggctttcgaagaaaaagtatgatcggacagttcatagagatcgggaag
ctcggcgccatgtttccagtgtacagcacaatctatatgctctcgccaacgtcaccaatg
ggtctgttcatgaagaaacctttcgtcaaattcatctgtcactcctcttcctatgcgttc
ttcttaatgcttctcgggatggcgtcacaacgtatcgagtacctggtaatcgaattattt
gggaacgcctggatgcacgagatactggccggatggaaaagacgggaacgtggctgcatt
cctggtttcgtcgaatccggtgtcatcatctacgtaatcagtctggtaataggcgaaatg
agatcattatggtcggatgggttgctggagtatatatcagacctttggaatatagtggac
ttcgttcagaatatgttttacgtgatttggttaatgttacgagtaaccgcatggattgta
gttcagagggaatactggaatggcctagatccttggtatcccagagatcaatggcacgcc
ttcgaccctatgcttctttctgagggagcctttgcagctggtatgattttcagttttttg
aagctagttcacatattcagcgtgaaccctcacctcgggccacttcaaatttccctgggg
aggatgataatagacattatcaagttcttcttcatttatactctggtgctgttcgccttt
ggctgcggaatgaatcaactaatgtggtattatgcggatttggagaaacaaaagtgttat
catatgaaggattttccggatctacctgattttgataatcaggagaaggcttgttcgatt
tggagacgtttcgccaatttgttcgagacatcgcaatcgcttttttgggccagtttcggt
atggtagatctgatgtcgtttgatctaactggaataaaaagcttcaccagattctgggcg
cttcttatgttcggttcttactccgtcataaacgttatcgtgttactgaacatgcttatt
gccatgatgtctaattcctatcaaatcatctcggaaagagctgacactgaatggaaattc
gccagaagtcacttatggatgagttacttcgaagatggtgacactgtgcctcctccattt
aacatggttccaaccggcaaaacgttcagtaggatcatcaagtgcgggaagaccgggcgg
caaaccagatctttgattaaaaagtccagagaaaaagcgttggcaagacatgacacggtg
atgcgattactcatcagacgttatgtaactgcggaacaaaggaaacgagacgagttcggt
atcaccgaagacgacgtaatggagatcagacaggacatttccacgttacgatacgagctt
attgatatacttcgacaaaacggaatgagaacaccaacgctcgacaaacaggatgccgca
ctatctggcaagaaaggtcgtgtgatggaacgtcgactgcaaaaggacttccagatcggt
atagtagagggcatcgtgaacgccgtgattcagagtgagaaggaacctaaagatgtgttc
agtcaaatcgcgaaggctattggtcgaaagagtagcggaagcaagaagaaagactggaac
gccatggtccggaagaacactttcgtaaaggatcctattggtagcacgaccgaggccact
atgaaacaaacgcgacgcagtatacgtaggcacttacaaactcagaattcggacttggcc
tcgttagatcctaatcgtttggttgattacaatcctaatctattggaagtatcaccgacc
acgaggattgcctacgcgaaattcatgataggtcgggcaagacctgttccagagcaaaag
gaggagggggaaagtaagaatgatgttgaaggatcgcaaaaatccgttcgaattgtaacc
gagcctgtccatgcaacgccgatcttgaaaaagactctactaaaatctttgagcagtggt
agcttggagaaaggtggagaaaaagcagtttcgatagaagtgagggcaccgtctccgatt
cccgaggatccgaaggaaggagaggttggaaattcacctcagagcaaagctggtttagcg
aaaaatccaacagatacaaaaccattgtcggaaaaagaggaaggagataggaagaacacc
gaagacgaggagaaaaagaaaagggaagaagaagaaaaaaggaaaaaggaaatggaagaa
gagaagaagaagaaagaggaagaaaagaagaaggatgaaggagaaaagaaaaaggaatcg
aacagcgagccatcaaaacctgcggctaatgaagataatgttccggtagctacgacaaaa
ttgaggggaaaatcgaaggcaactggccagataatgggtggatggatttaa
DBGET
integrated database retrieval system
