Bacillus thuringiensis serovar finitimus YBT-020: YBT020_24495
Help
Entry
YBT020_24495 CDS
T01839
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
btf
Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf00300
Lysine biosynthesis
btf00470
D-Amino acid metabolism
btf01100
Metabolic pathways
btf01110
Biosynthesis of secondary metabolites
btf01120
Microbial metabolism in diverse environments
btf01230
Biosynthesis of amino acids
Module
btf_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
btf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
btf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YBT020_24495 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YBT020_24495 (dapF)
Enzymes [BR:
btf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YBT020_24495 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
ADY24126
LinkDB
All DBs
Position
complement(4762501..4763367)
Genome browser
AA seq
288 aa
AA seq
DB search
MSQFSFTKMHGLGNSYIYVNMFEEQIPEEDLALVAEKVSNINIGIGADGMILICPSDVAP
VKMRMFNNDGSEGKSCGNGLRCVAKYAYEHKLVEDTVFTIETLAGIVTAEVTVEEGKVTL
AKIDMGAPRLTRAEIPMLGEGETPFIRENFLYNNHRYAFTAVSMGNPHAVIFVDDVEQAP
LTTLGPVLETHEMFPERVNVEFIEILNEEEMNFRVWERGSGVTQACGTGACAAVVASILN
GKMERGKEITVHLAGGDLMIAWTEEGNVLMKGPAEVICRGVYEYKIEA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagccaattttcttttacaaaaatgcatggtcttggcaatagttatatatatgtaaat
atgtttgaagaacaaattcctgaagaagatttagctcttgtggcggaaaaggtttcaaat
attaatattggtattggagcagatggaatgattttaatttgtccatctgacgtagcgccg
gtaaaaatgcgcatgtttaataatgatggatcagaaggaaagagctgtggtaacggttta
cgctgcgtagcgaaatatgcgtatgagcataaactagtagaagatacagttttcacaatt
gaaacgttagctggcattgtaacggcggaagtaacagtagaagaagggaaagttacatta
gcgaaaatcgatatgggagcacctcgtttaacccgtgcagaaataccgatgcttggtgaa
ggtgaaacaccatttattcgtgaaaacttcttatacaataaccatcgttatgcatttaca
gctgtttcaatgggaaatccgcatgcagttatttttgttgatgatgtagaacaagcacct
cttacaacacttggaccagttcttgagacacatgaaatgttcccagaacgagtaaatgtt
gaattcattgagattttgaatgaggaagagatgaacttccgcgtttgggaacgtggatct
ggtgtaacacaagcttgcggaacaggggcgtgtgctgcagttgtagcctctattttaaat
ggaaaaatggaacgtggtaaggaaattacagttcatttagctggcggtgatttaatgatt
gcatggacagaagaaggcaatgtgttaatgaaaggaccagcagaagtaatttgccgcgga
gtgtatgagtacaagatagaagcgtaa
DBGET
integrated database retrieval system
