KEGG   Bacillus thuringiensis Bt407: BTB_78p00140
Entry
BTB_78p00140      CDS       T02277                                 
Name
(GenBank) Hfq protein
  KO
K03666  host factor-I protein
Organism
btg  Bacillus thuringiensis Bt407
Pathway
btg02024  Quorum sensing
btg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BTB_78p00140
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BTB_78p00140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btg03019]
    BTB_78p00140
   03036 Chromosome and associated proteins [BR:btg03036]
    BTB_78p00140
Messenger RNA biogenesis [BR:btg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BTB_78p00140
Chromosome and associated proteins [BR:btg03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BTB_78p00140
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AFV22086
LinkDB
Position
BTB_78p:10218..10403
AA seq 61 aa
MKDIQNELYEQLKLAKKEITLFLISGVRMTGRIVGVDKFTILMIVNGKQQLIYKQAVSTI
V
NT seq 186 nt   +upstreamnt  +downstreamnt
atgaaagatattcaaaatgaattatatgagcaattaaaattagcaaaaaaagaaattaca
ctgtttttaattagtggtgtgcgtatgacaggacgaattgtaggtgtagacaaatttact
atacttatgatcgttaatggaaaacaacaacttatctataaacaagctgtatctactatt
gtttaa

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