Burkholderia thailandensis E254: BTN_2852
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Entry
BTN_2852 CDS
T03380
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bthe
Burkholderia thailandensis E254
Pathway
bthe02024
Quorum sensing
bthe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTN_2852 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTN_2852 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthe03019
]
BTN_2852 (hfq)
03036 Chromosome and associated proteins [BR:
bthe03036
]
BTN_2852 (hfq)
Messenger RNA biogenesis [BR:
bthe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BTN_2852 (hfq)
Chromosome and associated proteins [BR:
bthe03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BTN_2852 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AIT21372
LinkDB
All DBs
Position
1:complement(3214819..3215058)
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AA seq
79 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEAAS
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgtaaagagcac
gtgccggtttcgatctatctcgtgaacggcatcaagctccaagggaacatcgaatcgttc
gaccagtacgtcgtgttgctccggaacacggttacccagatggtttacaagcacgccatt
tcgacggtcgtgccggcgcgtccggtgaacttccacccggatgcggaagcagcgtcctaa
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