Bacillus thuringiensis serovar kurstaki HD-1: BTK_00515
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Entry
BTK_00515 CDS
T03473
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bthi
Bacillus thuringiensis serovar kurstaki HD-1
Pathway
bthi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bthi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTK_00515 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthi03021
]
BTK_00515 (rpoB)
03400 DNA repair and recombination proteins [BR:
bthi03400
]
BTK_00515 (rpoB)
Enzymes [BR:
bthi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTK_00515 (rpoB)
Transcription machinery [BR:
bthi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTK_00515 (rpoB)
DNA repair and recombination proteins [BR:
bthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTK_00515 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AIE31237
LinkDB
All DBs
Position
119579..123349
Genome browser
AA seq
1256 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYSVDECKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEITELLGDNEYLSNTLEKDNTDSTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAAEGTILDRRTLDRILPYLEKNIGFKTAKPMGGVVEGDVELQSIKIYAPESEGERVI
NVIGNANITRDVKHITPGDILASISYFFNLLYKVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNEFG
FIETPYRRVDPETGLVTGHVDYLTADEEDNYVVAQANMKLSDEGEFLSEDIVARFRGENI
VTNRERIDYMDVSQKQVVSAATAFIPFLENDDSNRALMGANMQRQAVPLMNPESPIVGTG
MEYVSAKDSGAAGICKHPGVVERVEAREVWVRRYVEVDGQTVKGDLDRYKMQKFIRSNQG
TCYNQRPIVSVGNEVVKGEILADGPSMELGELALGRNVLVGFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNRADGDEL
PPGVKQLVRAYIVQKRKISVGDKMAGRHGNKGVISRILPEEDMPYVPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAARSGVNQLVRAYIVQKRKISEGDKMAGRHGNKGDISRILPEE
DMPYLQDGTPIDIMLTPLGVPSRMNIGQVFELQLGMAARYLGIHIATPVFDGAREEDVWG
TIEEAGMANDAKTILYDGRTGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQ
PLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEP
GVPESFKVLIKELQSLGMDVKMMSSDDTEIEMRDTEDDDDHQSADKLNVEVETTKE
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatacggacgccaccgccaacgaagaagttatgcccgtatt
agtgaagtattagagttaccaaatcttatcgaaattcaaacctcttcttatcagtggttt
cttgatgagggtttgcgagaaatgttccaagacatttctccgattgaagactttacggga
aatctatcgcttgaatttatcgactacagcttaggtgaacctaaatactctgtagacgaa
tgcaaagagcgtgatgtgacgtatgcagcaccacttcgtgtaaaagtgcgtctaatcaac
aaggaaactggtgaagtaaaagaacaagatgtgttcatgggagatttcccactcatgaca
gagactggaacattcgtaattaacggtgcagaacgtgttatcgtttcccagttagttcgc
tctccaagcgtatactatagtggcaaagtggataaaaacggaaaacgtggttttactgct
actgtaattccaaaccgcggagcttggttagagtatgagacagatgctaaggatgttgta
tatgtgcgtattgaccgtacgcgtaaacttcctgtaactgttttgttacgcgcattaggg
tttggctctgatcaagaaatcaccgagcttttaggtgataacgaatacttaagcaacaca
ttagaaaaagacaacacagatagcacagaaaaagcattgcttgaaatttatgagcgtcta
cgtcctggtgaaccaccaacagtagaaaatgctaagagcttacttgtgtctcgtttcttc
gatccaaagcgctacgatttagcaaatgtaggtcgctataagatcaacaagaagttacac
attaaaaacagattgtttaatcaacgtttagctgaaacattagtggatccagaaactggt
gaaattttagcggcagaaggaacaatcttagatcgtcgtacacttgatcgcattttacct
tacttagagaaaaacattggattcaaaacagcgaaaccaatgggtggagtggtagaaggc
gatgttgagctgcaatctattaagatttatgctcctgagtcggaaggcgaacgcgtaatt
aatgtaattggtaatgcaaacattactcgtgatgtgaaacacatcacaccaggtgatatc
cttgcttctatcagttacttcttcaacctactatacaaagtaggggatacagatgatatt
gaccatttaggaaaccgtcgtctgcgttctgttggagaactattacaaaatcaattccgt
atcggtctttctcgtatggaacgtgttgttcgtgagagaatgtcgatccaagatacaaat
gcgattacaccacaggcactaattaatattcgtcctgttattgcatctattaaagagttc
ttcggaagttctcagttatctcagtttatggaccaaacaaatccattagcagagttaact
cacaaacgaagactatctgcattaggacctggtggtttaacgcgtgagcgcgcaggcttt
gaagtgcgtgacgttcattactctcactacggtcgtatgtgtccgattgaaacaccagag
ggaccaaacatcggtttgattaactcattatcttcgttcgcgaaagtaaatgagtttggt
ttcattgaaacaccataccgtcgtgttgacccagaaactggtcttgtaacagggcatgtt
gattacttaacagcagatgaagaagataattatgttgtagcccaagcgaatatgaaatta
tctgacgaaggtgaattcctaagtgaagatatcgtagctcgtttccgtggtgaaaacatt
gtcacaaatagagaacgcatcgactacatggatgtatctcaaaaacaagtagtgtcggca
gcgacagcttttattcccttcttagaaaacgatgactctaaccgcgcccttatgggagcg
aacatgcagcgtcaggcggttccgttaatgaatccggaatctccgattgttggtacaggt
atggagtacgtatcagcaaaagactcaggtgctgcaggaatctgtaaacatcctggtgtt
gttgagcgcgtagaagcacgtgaagtttgggtacgtcgctatgtagaagttgacggtcaa
acagtaaaaggcgacttagatcgctacaaaatgcaaaaattcattcgttctaaccaagga
acttgttacaaccaacgtccaatcgtaagtgttggaaatgaagttgtaaaaggtgaaatc
cttgcggatggtccttctatggaattaggtgaactagcacttggacgtaacgtgcttgtt
ggcttcatgacttgggacggttataactacgaggatgcgatcatcatgagtgagcgcctt
gtaaaagatgatgtgtacacttctattcatattgaagaatatgaatcagaagctcgtgat
acgaaacttggaccagaagaaattacacgtgacattccaaacgttggggaagacgcatta
cgtaaccttgacgagcgcggtatcattcgcgttggggctgaagtaaaagatggagattta
cttgttggtaaagtaacacctaaaggtgtaacagaattaacagctgaagaacgtctatta
catgctatctttggagaaaaagcgcgtgaagtacgtgatacatcactacgtgtaccacac
ggtggcggcgggattatcttagacgtaaaagtattcaaccgtgcagatggcgatgaattg
ccaccaggcgtgaagcaacttgtacgtgcatatatcgttcaaaaacgtaaaatttctgta
ggtgacaagatggccggacgtcacggcaacaaaggtgttatttctcgtattttaccagaa
gaagatatgccttacgtaccagacggtacgccaatcgatatcatgttaaacccattaggg
gtaccatctcgtatgaatatcggtcaggtattagagcttcatcttggtatggcagcaaga
tcaggcgtgaatcaacttgtacgtgcatatatcgttcaaaaacgtaaaatttctgaaggt
gacaagatggccggacgtcacggtaacaaaggggatatttctcgtattctaccagaagaa
gatatgccttacttacaagacggtacgccaatcgatatcatgttaaccccattaggggta
ccatctcgtatgaatatcggtcaggtatttgagcttcagcttggtatggcagcaagatac
cttggcattcacattgcaacaccagtattcgatggtgctcgtgaggaagatgtttggggc
acaattgaagaagctggtatggcaaatgacgcgaaaacaatcctgtatgacggacgtact
ggtgaaccattcgataaccgcgtatctgttggtgtcatgtatatgattaaacttgcgcac
atggttgacgataaacttcatgctcgttctactggaccatactcacttgtaacgcagcaa
cctcttggaggtaaagctcagttcggtggacagcgtttcggtgagatggaggtttgggca
cttgaagcttacggtgctgcttatactcttcaagaaatcttaacagtgaagtctgatgat
gttgttggacgtgttaagacttatgaagcaattgttaaaggcgaaaatgttccagaacca
ggcgttcctgaatcattcaaagtattgattaaagagctgcaaagtttaggtatggacgtt
aaaatgatgtctagcgacgatacagaaattgaaatgcgtgatacagaagatgacgatgat
catcaatcagcagataaattgaatgtcgaagttgagacaactaaggaataa
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integrated database retrieval system
