Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch3711
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Entry
H175_ch3711 CDS
T02474
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht02024
Quorum sensing
btht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H175_ch3711
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H175_ch3711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btht03019
]
H175_ch3711
03036 Chromosome and associated proteins [BR:
btht03036
]
H175_ch3711
Messenger RNA biogenesis [BR:
btht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H175_ch3711
Chromosome and associated proteins [BR:
btht03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
H175_ch3711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AGG02423
LinkDB
All DBs
Position
complement(3677425..3677649)
Genome browser
AA seq
74 aa
AA seq
DB search
MKQSINIQDQFLNQLRKENTFVTLYLLNGFQLRGLIKGFDNFTVLLETEGKQQLIYKHAI
STFVPQKNVSIELE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcaatcaatattcaagatcagtttttaaatcaactccgtaaagaaaatacg
tttgttacgctgtacttattaaatggtttccagcttcgtggactaattaaaggatttgat
aattttacagtcctactggaaacagaaggtaagcaacagcttatttataaacatgcaatt
tctacatttgtaccacaaaaaaatgtttcaattgaattagaatag
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