Bordetella trematum: SAMEA390648701365
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Entry
SAMEA390648701365 CDS
T04322
Symbol
rfbC
Name
(GenBank) dTDP-6-deoxy-D-glucose-3%2C5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
btrm
Bordetella trematum
Pathway
btrm00521
Streptomycin biosynthesis
btrm00523
Polyketide sugar unit biosynthesis
btrm00541
O-Antigen nucleotide sugar biosynthesis
btrm01100
Metabolic pathways
btrm01110
Biosynthesis of secondary metabolites
btrm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAMEA390648701365 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAMEA390648701365 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAMEA390648701365 (rfbC)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SAMEA390648701365 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
SAI68632
UniProt:
A0A157RGN9
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All DBs
Position
1:1450222..1450824
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AA seq
200 aa
AA seq
DB search
MKCFATDLPGVVRLEPEVLGDARGWFMERFRQDRFEAGLRALGLPPPPPFVQDNHSRSAA
GVLRGLHYQLPPHEQGKLVSVLAGAIFDVAVDIRAASPTFGQWTGVLLSAANRHSLWVPP
GFAHGFLALEEGSEVLYKVTSYYAPASERCLRWDDPQLAIGWPAPAQEMSPRDRQAPGLA
QALAAGQLPGQRADPPTAGS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgctttgccactgatttgcccggcgtggtgcgcctggaacccgaggtgctgggt
gacgcgcggggctggttcatggagcgttttcgccaggaccgcttcgaagcgggcctgcgt
gccctgggtctgccgccaccgccgcccttcgtgcaggacaatcattcgcgttcggccgcc
ggcgtgctgcgcggcctgcattaccagctgccgccccatgagcagggcaagctggtgagc
gtgctggctggcgcgatcttcgatgtggcggtggatatccgtgcggcctcgcccaccttc
gggcaatggaccggcgtgctgctgtcggcggccaaccggcacagcctgtgggtcccgcca
ggctttgcgcatggtttcctggccctggaagagggcagcgaggtgctctacaaagtcact
tcctactatgcccccgccagcgagcgctgcctgcgctgggatgacccgcagttggccatc
ggctggccggcgcctgcgcaggagatgtcgccgcgtgaccgccaggcgcccgggctggcg
caggcgctggccgccgggcagctgcccggccagcgcgccgatcctccgactgccgggagt
taa
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