KEGG   Bacillus tropicus: FJR70_00845
Entry
FJR70_00845       CDS       T06661                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
btro  Bacillus tropicus
Pathway
btro02024  Quorum sensing
btro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FJR70_00845 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FJR70_00845 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btro03019]
    FJR70_00845 (hfq)
   03036 Chromosome and associated proteins [BR:btro03036]
    FJR70_00845 (hfq)
Messenger RNA biogenesis [BR:btro03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FJR70_00845 (hfq)
Chromosome and associated proteins [BR:btro03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    FJR70_00845 (hfq)
SSDB
Motif
Pfam: Hfq LSM DUF5608 Hfq_1
Other DBs
NCBI-ProteinID: QDF21670
LinkDB
Position
157865..158053
AA seq 62 aa
MEHLQDELYKQIKEEKGIVTIFLKSGVRIVGEVVAIDKFTVLMLVDGKQQLIYKQAISAI
MK
NT seq 189 nt   +upstreamnt  +downstreamnt
ttggaacatttacaagatgagctatataaacaaataaaagaagaaaaaggtattgttaca
atttttttaaagagtggcgttagaatagtaggagaagttgttgcaatagataaatttacc
gttttaatgttagttgacggaaaacaacaacttatttacaagcaggctatatcagcaata
atgaaataa

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