Burkholderia sp. CCGE1001: BC1001_3289
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Entry
BC1001_3289 CDS
T01424
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BC1001_3289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bug03021
]
BC1001_3289
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_3289
Enzymes [BR:
bug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BC1001_3289
Transcription machinery [BR:
bug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BC1001_3289
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BC1001_3289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
UbiD
BSH_YknX
Nif11
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
ADX56703
LinkDB
All DBs
Position
1:complement(3721018..3725124)
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADTPSTQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYMLSPPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMPE
GAQMEFVPERLRGEVARFDITDRDGNVIVQKDKRINAKHIRDLDNAKTKFISVPEDYLLG
RVLAKNVVDGDTGEVIANANDEITETVLEKLREAKIKDIQTLYTNDLDQGPYISSTLRID
ETADKMAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEI
VGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDGKVTDQIDYLSAIEEGRYVIAQANAAVAEDGTLTDELVSSREAGETLMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKAVVGTGIERTVAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDEEAVAGDVGVDIYNLIKYTRSNQNTNINQRPIVKVG
DKVSRGDVLADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLTGKVANGGPKKLAKGTKIEQAYLEDLDHYHWFDIR
LADEEAAAQLEAIKDSIEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEELREFLTKIYNESGRAEELDSFTDEEIVELAKNLREGVPFAT
PVFDGATEEEMSRALDLAFPDDIAQNLGMTPSKNQVRLYDGRTGEMFERTVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgtattcgcaagagttttgcgaaacgccccatc
gttcaccaagtacctttcctgctggctacccagcttgaatcattcagcacgtttctgcaa
gcagatacgccgtctacgcagcgcaagccggaaggcctgcaggctgcgtttacatccgtt
ttcccgatcgtttcgcacaacgggttcgcacgcctcgagttcgtcagctacatgctgtcg
ccgccggcattcaacatcaaggaatgtcagcagcgcggtttgacctactgctcagcgctg
cgcgccaaagtgcgtctggtgctgctcgataaagaatcgccgagcaagccggtcgtcaag
gaagtgaaggaacaggaagtgtacatgggcgaaattccgctcatgacgccgacgggttcg
ttcgtcattaacggcacggagcgcgtgatcgtttcgcagctgcaccgttcgcccggcgtg
ttcttcgagcacgacaagggcaagacgcacagctcgggcaagctcctgttctccgcacgt
atcatcccttaccgcggttcgtggctcgacttcgagttcgacccgaaggacgtgctgtac
ttccgcgtcgaccgccgccgcaagatgccggtcacgatcctgctgaaggcaatcggcctc
acgccggaacagatcctcgcaaacttcttcgtgttcgataacttcacgctgatgcccgaa
ggcgcgcagatggagttcgtgccggagcgtctgcgtggcgaagtcgcgcgtttcgacatt
accgaccgcgacggcaacgtgatcgtccagaaggacaagcggatcaacgcgaagcacatc
cgcgacctggacaacgcgaagaccaagttcatctcggttccggaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgacaccggtgaagtcatcgcgaatgcgaac
gacgaaatcacggaaaccgtcctcgaaaagctgcgcgaagcgaagatcaaggacatccag
acgctttatacgaacgatctggaccagggtccgtacatctcgtccacgctgcgtatcgac
gaaaccgccgacaagatggccgcgcgcatcgcgatctaccgcatgatgcgcccgggcgag
ccgccgaccgaagaagcggtcgaggcgctgttcaaccgcctgttctacagcgaagacgca
tacgacctgtccaaggtgggtcgtatgaagttcaatcgtcgcgtgggtcgcgacgagatc
gtcggcccaatgacgctgcaggacgacgacatcctcgccacgatcaagattctggtcgag
ctgcgtaacggcaagggcgaagtcgacgacatcgaccacctcggcaatcgccgtgtgcgt
tgcgtcggcgaactggcggagaaccagttccgcgccggtctggtgcgcgtggaacgggct
gtgaaggaacgcctcggccaggccgaaagcgaaaatctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgattcgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaattacccacaagcgccgtgtttcggcactgggc
ccgggtggtttgacgcgtgagcgcgcaggcttcgaagtgcgcgacgtgcatcctacgcat
tacggccgcgtctgcccgattgaaacgcctgaaggtccgaacatcggcctgatcaactcg
ctcgcgctgtacgcgcacctgaacgaatacggcttcctcgaaacgccgtatcgcaaggtc
gtggacggcaaggtgacggaccagatcgactatctgtcggcgatcgaagaaggccgttac
gtgatcgcgcaggcgaacgcggcggtggctgaagacggcacgctgaccgacgaactggtg
tcgtcgcgtgaagcgggcgaaacgctgatggtcacgccggaccgcatccagtacatggac
gtggcgccgtcgcagatcgtctcggtcgctgcatcgctgattccgttcctcgagcacgac
gacgcgaaccgcgcattgatgggctcgaacatgcagcgtcaggctgtgccgtgtctgcgt
cctgaaaaggccgtggtcggtaccggtatcgagcgcacggtggcggtcgactcgggcacg
acggttcaggcgttccgcggcggcgtggtcgactacgtcgacgcgggccgtatcgtgatt
cgcgtgaacgacgaagaagcggtggctggcgacgtcggcgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaaggtcggc
gacaaggtttcgcgcggcgacgtgctggctgacggcgcatccacggacctcggcgaactg
gcgctcggccagaacatgctggtcgcgttcatgccgtggaacggctacaacttcgaagac
tcgatcctgatctcggagaaggtggtggccgacgaccgttacacgtcgatccacatcgaa
gaactgaacgtcgtggctcgcgacacgaagctcggaccggaggaaatcacgcgcgacatc
tcgaacctggctgaagtgcaactcggccgtctcgacgagtcgggcatcgtctacatcggc
gcggaagtcgaagcaggcgacgtgctggtcggcaaggtcacgcccaagggcgaaacccag
ctgacgccggaagagaagctgctgcgcgccattttcggcgagaaggcttcggacgtgaag
gacacctcgctgcgcgtgccgtcgggcatgagcggcacggtgatcgacgtccaggtgttc
acgcgcgaaggcattcagcgcgacaagcgcgcgcaacagattatcgacgacgaactgaag
cgctatcgtctcgacttgaacgaccagctgcgcatcgtggaaggcgacgcgttccagcgt
ctcgcgcgcatgctgacgggcaaggtcgcgaacggcggtccgaagaagctcgcgaagggc
acgaagatcgaacaggcttacctggaagatctcgatcattaccactggttcgacatccgc
ctcgcggacgaagaagcagcggcgcagctcgaagcgatcaaggattcgatcgaacagaag
cgtcaccagttcgacctggcgttcgaagaaaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtatctggcagtcaagcgccgtctgcag
cctggcgacaagatggcaggccgtcacggtaacaagggtgtcgtgtcgaagatcgtgccg
atcgaagacatgccgtacatggccgacggccgtccggctgacgtcgttctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctcgaagtgcatctgggctgggccgcg
aagggtctcggctggcgtatcggcgaaatgctgcagcgtcaggcgaagatcgaagaactg
cgcgagttcctgaccaagatctacaacgagtcgggccgcgccgaagagctggacagcttc
accgacgaggaaatcgtcgaactggcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgacggtgcgacggaagaggaaatgtcgcgcgcgctggatctggcgttcccg
gacgacatcgcgcagaacctcggcatgacgccgtcgaagaatcaggtgcgtctgtacgac
ggccgcacgggcgaaatgttcgaacgtacggtgacggtcggctacatgcactacctgaag
ctgcaccacctggtcgacgacaaaatgcacgcgcgttccacgggcccgtactcgctcgtg
acgcagcagccgttgggcggtaaggcgcagttcggtggccagcgtttcggtgaaatggaa
gtgtgggcgctcgaagcgtacggcgcatcgtacgtgctgcaagaaatgctgacggtgaag
tcggacgacgtgacgggccggaccaaggtgtacgagaacctggtcaagggcgatcacgtg
atcgatgctggcatgccggagtccttcaacgtgttggtgaaggaaatccgctcgctcggt
atcgatatcgacctcgaccgcaactaa
DBGET
integrated database retrieval system
