Stenotrophomonas maltophilia JV3: BurJV3_0755
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Entry
BurJV3_0755 CDS
T01596
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BurJV3_0755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buj03021
]
BurJV3_0755
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_0755
Enzymes [BR:
buj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BurJV3_0755
Transcription machinery [BR:
buj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BurJV3_0755
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BurJV3_0755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
PrmC_N
Motif
Other DBs
NCBI-ProteinID:
AEM50089
LinkDB
All DBs
Position
859065..863219
Genome browser
AA seq
1384 aa
AA seq
DB search
MTSYSFTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENVDPAKRTDHGLHAALKS
VFPIASYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDRESSTKAIK
YVKEQEVYLGEIPLMTENGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSAR
IIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYSNEEMLAEFFEINTFHINPD
EGVQLELVPERLRGETLGFDLADGDKVIVEAGKRITARHIKQLEASGIAALAVPDDYIVG
RILSHDVVDASTGELLAQANDEITDEQLQAFRKAGVDAVGTLWVNDLDRGPYLSNTLRID
PTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSAVGRMKFNRRVGRKET
TGEAVLYDSKYFGERNDEESKRLVAAHGDSSDILDVIKVLTEIRNGRGVVDDIDHLGNRR
VRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLS
QFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLI
NSLAVYARTNQYGFLETPYRKVVDGKVYDEVEFLSAIEENEYVIAQANALTNADSVLTEQ
FVPCRFQGESLLKPPAEVHFMDVSPMQTVSIAAALVPFLEHDDANRALMGANMQRQAVPT
LRAQKPLVGTGIERAVARDSGVTVNARRGGEIVQIDAARIVVKVNEEEIVGATDAGVDIY
NLVKYTRSNQNTCINQRPLVQVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYN
FEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVV
YIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDV
QVFTRDGIEKDKRARQIEESEIKRVKKDFDDQFRILEAAIYMRLRSQIVGKVVNGGAGLK
KGDVITDAFLDGLKKADWFALRMKDEDASEAIERAQKQIQAHEKEFERRFADKRGKITAG
DDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMASGETVDIVLN
PLGVPSRMNIGQILEVHLGWAAKGLGRKIQAMMEAQAAVADLRKFLDDIYNHDDTNVANR
VDLSQFSDEELLRLARNLTDGVPMATPVFDGATEAEIKRMLELADLPSSGQTQLYDGRTG
EAFDRHTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINME
LEDN
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctattcgttcaccgaaaaaaagcgtatccgcaaggatttcggcaagcagcgc
tcgattctcgaagtgccgttcctgctcgccatccaggtggattcctatcgtgaattcctg
caggaaaacgtcgatccggccaagcgcacggaccacggcctgcacgctgcgctgaagtcg
gtcttcccgatcgccagctacagcggcaacgctgccctggaatacgtcggctacaagctg
ggcgaaccggtcttcgacgagcgtgagtgccgccagcgcggcatgagctacggcgccccg
ctgcgcgtgaccgtgcgcctggtgatctacgaccgtgagtcgtcgaccaaggccatcaag
tacgtgaaggagcaggaggtctatctgggcgaaatcccgctgatgaccgagaacggcacc
ttcatcgtcaacggcaccgagcgcgtcatcgtctcccagctgcaccgctcgccgggcgtg
ttcttcgatcacgaccgtggcaagacccacagctcgggcaagctgctgtacagcgcccgc
atcattccttaccgcggctcctggctggacttcgagttcgacccgaaggacgcgctgttc
acccgtatcgaccgccgccgcaagctgccggtgtcgatcctgcttcgcgcgctcggctac
agcaacgaagagatgctggccgagttcttcgagatcaacaccttccacatcaacccggat
gaaggcgtccagctggagctggtgccggagcgcctgcgtggcgagaccctgggcttcgac
ctcgccgacggcgacaaggtcatcgtggaagccggcaagcgcatcaccgcgcgtcacatc
aagcagctggaagcctcgggcattgccgccctggccgtgccggacgactacatcgtcggc
cgcatcctgtcgcacgacgtggtcgatgcctcgaccggcgaactgctggcccaggccaac
gacgagatcactgacgagcagctgcaggccttccgcaaggccggtgtggatgccgtgggc
accctgtgggtgaacgacctggatcgtggcccgtacctgtccaacaccctgcgtatcgac
ccgaccaagacccagctggaagccctggtcgagatctaccgcatgatgcgtccgggcgag
ccgccgaccaaggatgccgcgcagaacctgttccacaacctgttcttcaccttcgagcgc
tacgacctgtccgcggtcggccgcatgaagttcaaccgtcgcgtgggccgcaaggaaacc
accggcgaagccgtgctgtacgacagcaagtacttcggcgagcgcaacgacgaagagtcc
aagcgcctggtcgctgcccacggcgacagctccgacatcctggacgtgatcaaggtcctg
accgagatccgcaacggtcgcggcgtggtcgatgacatcgatcacctgggcaaccgtcgc
gtgcgttcggtcggcgaaatggccgagaacgtgttccgcgtcggcctggtccgcgtcgag
cgcgcggtcaaggagcgcctgtcgatggccgagtcggaaggcctgaccccgcaggagctg
atcaacgccaagccggtcgccgctgccatcaaggagttcttcggctcctcgcagctgtcg
cagttcatggaccagaacaacccgctgtcggaagtgacgcacaagcgtcgcgtctcggcc
ctgggcccgggcggtctgacccgtgagcgcgccggcttcgaagtgcgcgacgtgcacccg
acccattacggccgcgtctgcaccatcgaaaccccggaaggcccgaacatcggcctgatc
aactcgctggccgtgtacgcccgcaccaaccagtacggtttcctcgagaccccgtaccgc
aaggtcgtggacggcaaggtctatgacgaagtcgagttcctgtcggcgatcgaagagaac
gagtacgtcattgcgcaggccaacgccctgaccaatgccgacagcgtgctgaccgagcag
ttcgttccgtgccgcttccagggcgaatcgctgctgaagccgccggcggaagtccacttc
atggacgtctcgccgatgcagaccgtgtcgatcgcggccgcgctggttccgttcctggag
cacgatgacgccaaccgcgcactgatgggcgccaacatgcagcgtcaggccgtgccgacc
ctgcgtgcgcagaagccgctggtcggcaccggcatcgagcgcgccgtggcgcgtgactcg
ggtgtgaccgtgaacgcccgtcgtggtggtgagatcgtgcagatcgacgccgcccgcatc
gtagtcaaggtcaacgaggaagagatcgttggcgccaccgacgccggcgtggacatctac
aacctggtcaagtacacccggtcgaaccagaacacctgcatcaaccagcgtccgctggtc
caggtgggtgacgtcatcgcccgcggcgacgtgctggccgacggtccgtccaccgacatc
ggcgagctggccctgggccagaacatgctgatcgcgttcatgccgtggaacggctacaac
ttcgaagactccatcctgctctccgagcgcgtggtggaagaggatcgctacaccacgatc
cacatcgaagagctgacctgcgtcgcgcgtgacaccaagctggggccggaggaaatctcg
gccgacatcccgaacgtctccgagcaggcgctgaaccgcctggacgagagcggcgtggtg
tacatcggtgcagaagtgcgcgctggcgacatcctggtcggcaaggtcaccccgaagggc
gaaagccagctgaccccggaagagaagctgctgcgcgcgatcttcggcgagaaggcttcg
gacgttaaggacagctcgctgcgcgttccgccgggcatggacggcaccgtcatcgacgtg
caggtcttcacccgcgacggcatcgagaaggacaagcgcgcccgccagatcgaagagtct
gaaatcaagcgcgtcaagaaggacttcgacgaccagttccgcatcctggaagccgccatc
tacatgcgtctgcgttcgcagatcgtgggcaaggtggtcaacggtggcgctggcctgaag
aagggtgacgtgatcaccgacgccttcctggacggcctgaagaaggctgactggttcgcc
ctgcgcatgaaggacgaggacgcctcggaagccatcgagcgcgcccagaagcagatccag
gcgcacgagaaggaattcgagcgtcgcttcgccgacaagcgcggcaagatcaccgccggc
gacgacctcgccccgggcgtgctgaagatggtcaaggtgttcctggccgtgaagcgccgc
atccagccgggcgacaagatggcaggccgccacggcaacaagggtgtggtctccaacgtg
gtgccggtcgaggacatgccgtacatggcctcgggcgaaaccgtggacatcgtgctgaac
ccgctgggcgtgccgtcgcgtatgaacatcggccagatcctggaagtgcacctgggctgg
gccgccaagggtctgggtcgcaagatccaggcgatgatggaagcccaggcggcggtcgcc
gacctgcgcaagttcctggacgacatctacaaccacgacgacaccaacgtggccaaccgt
gtcgacctgtcgcagttcagcgacgaggaactgctgcgcctggcccgcaacctgaccgat
ggcgtgccgatggccaccccggtgttcgacggcgctaccgaagcggaaatcaagcgcatg
ctggaactggccgacctgccgagcagtggccagacccagctgtacgacggccgcaccggt
gaagccttcgatcgccacaccaccgttggctacatgcactacctgaagctgaaccacctg
gtcgacgacaagatgcacgcccgttcgaccggtccgtactcgctcgtcacccagcagccg
ctgggcggcaaggcgcagttcggcggccagcgcttcggtgaaatggaagtctgggcgctg
gaagcctacggcgcggcctacaccctgcaggaaatgctgacggtgaagtccgatgacgtg
cagggccgcaaccagatgtacaagaacatcgtcgacggtgagcacgagatggtcgcgggc
atgccggaatccttcaacgtgctcgtgaaggaaatccgctcgctggccatcaacatggaa
ctggaagacaactga
DBGET
integrated database retrieval system
