Burkholderia lata: Bcep18194_A3895
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Entry
Bcep18194_A3895 CDS
T00286
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bur
Burkholderia lata
Pathway
bur00260
Glycine, serine and threonine metabolism
bur00460
Cyanoamino acid metabolism
bur00630
Glyoxylate and dicarboxylate metabolism
bur00670
One carbon pool by folate
bur00680
Methane metabolism
bur01100
Metabolic pathways
bur01110
Biosynthesis of secondary metabolites
bur01120
Microbial metabolism in diverse environments
bur01200
Carbon metabolism
bur01230
Biosynthesis of amino acids
bur01240
Biosynthesis of cofactors
bur04981
Folate transport and metabolism
Module
bur_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bur00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bcep18194_A3895
09102 Energy metabolism
00680 Methane metabolism
Bcep18194_A3895
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bcep18194_A3895
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bcep18194_A3895
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bcep18194_A3895
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bcep18194_A3895
Enzymes [BR:
bur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bcep18194_A3895
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABB07494
UniProt:
Q39J72
LinkDB
All DBs
Position
1:811150..812397
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPEIFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYEAAEQLAQEHKPKLIVAGASAFSL
KIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGPAEAEQVGNLIADVLDNPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccattgcgaacgtcgatcccgaaatctttgccgcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggccgtgatggctgcgcagggttcgcaactcacgaacaagtacgcggaagggtat
ccgggcaagcgctactacggcggctgcgaatacgtggacgtcgttgagcagctggcgatc
gaccgcgtgaagcagctgttcggcgcggaagcggcgaacgtgcagccgaactcgggttcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgcccgtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgaaaacgaagacatcgactacgaagcggccgag
cagctcgcgcaggaacacaagccgaagctgatcgtcgcgggcgcgtctgcgttctcgctg
aagatcgatttcgagcgtctggcgaagatcgcgaagtcggtcggcgcgtacctgatggtc
gacatggcccactacgcaggcctgatcgcagcgggcgtgtacccgaacccggtgccgcac
gcggacttcgtgacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagccgatcaactcggcgatcttcccggggatccagggc
ggcccgctgatgcacgtgatcgcgggcaaggccgtggcgttcaaggaagcgctgtcgccg
gaattcaaggcgtaccaggagaaggtggtcgagaacgcccgcgtgctggctgaaacgctg
gtgaagcgtggcctgcggatcgtgtcgggccgtacggaaagccacgtgatgctggtggac
ctgcgtgcgaagcacatcacgggcaaggcggcggaagcagcgctgggcgcggcgcacatc
acggtgaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggtgtg
cgcctgggttcgccggcaatgacgacgcgcggcttcggtccggcggaagcggaacaggtg
ggtaacctgatcgcggacgtgctggacaacccggaagatgcagcgacgatcgagcgcgtg
cgcgcgcaggtcgccgagctgaccaagcgtttcccggtctatcgctga
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