KEGG   Bombus vancouverensis nearcticus: 117153638
Entry
117153638         CDS       T07628                                 
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
bvan  Bombus vancouverensis nearcticus
Pathway
bvan03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bvan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117153638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bvan03400]
    117153638
Enzymes [BR:bvan01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     117153638
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     117153638
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     117153638
DNA repair and recombination proteins [BR:bvan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117153638
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     117153638
SSDB
Motif
Pfam: DcpS_C zf-C2HE HIT zf-C2H2
Other DBs
NCBI-GeneID: 117153638
NCBI-ProteinID: XP_033183751
LinkDB
Position
Unknown
AA seq 203 aa
MLFITWTKCRKFVSLFTSTDVIAPKRRDWATGLLVSMEDPQYKVKENDKVVVIKDKYPKA
QYHYLVIPKADIPSLWHIKKENEDLLFHMHSVAEDLTQEHKESEFLIGYHAVPSMHRLHL
HVISTDFNSPCLKTKYHWNSFTTPFFLHSADICHQLREKGELKKLKSEESAQHLNTPLKC
HKCPTISKNMPDLKKHLLAHLSN
NT seq 612 nt   +upstreamnt  +downstreamnt
atgctatttataacatggacaaagtgccgaaaatttgtttcactgtttacatcgaccgat
gtaatagctccaaagaggcgtgattgggcaacaggtttgcttgtttctatggaagatcct
cagtataaagtaaaggaaaatgataaagttgttgtcatcaaagataaatatccaaaagcc
caatatcactatttagttataccaaaagcagacattccatctctgtggcacataaaaaaa
gaaaatgaagatttattgttccacatgcatagcgttgctgaagatttaactcaagaacat
aaagagtctgagttccttattggataccatgctgtaccaagcatgcacagattacattta
cacgtaataagtacagattttaatagtccttgtctaaagaccaagtatcattggaattcg
tttacaactcccttcttcttacattcagcagacatttgccaccagttacgcgagaaaggt
gaactgaaaaaattgaaatcggaggagagcgcgcaacacttgaatactccgctaaagtgt
cacaaatgcccaaccatttcaaagaatatgccggatttaaaaaagcatttgttggcgcat
ttgtcaaattaa

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