Bombus vancouverensis nearcticus: 117163743
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Entry
117163743 CDS
T07628
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bvan04040
]
117163743
Ion channels [BR:
bvan04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117163743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
117163743
NCBI-ProteinID:
XP_033202233
LinkDB
All DBs
Position
Unknown
AA seq
2062 aa
AA seq
DB search
MSEDSDSVSEEERSLFRPFTRESLAAIEARIAEEHAKQKELEKKRAEGEGGFGRKKKKKE
VRYDDEDEDEGPQPDQMLEQGAPIPVRLHNEFPPELASTPLEDIDSFYHNQRTFVVISKG
KDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTIEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKNFPEDGSWGNLTDENWERFVSNETNWYVDEAKNMPLCGNSSGAGQCLPGYTCLQGYGE
NPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVN
LILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAALAKENKLAAQAAAREAAAVAAVAAA
DQIVKSPSDFSCHSYELFVGQEKGNDDNNKERMSIRSIESVSEHRVKQINNHTATTKPRK
VSAVSRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRFVGPPGGD
RKPLVLSTFLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHASRLSY
TSHGDLIGGIANAGKPMTKESQLRIRSVRPPSVNGHFTDSNQKYHYEGDLEDPMGKAKQQ
DNPFIEPSQQHAVVDMKDVMVLNDIIEQAAGRQSRTPEQGVSTYYFPTDDDEEGPKFKDK
LLAAVLRCIDIFCVWDCCWLWLEFQKYVSLVVFDPFVELFITLCIVVNTLFMALDHHDMD
KDMEKVLKTGNYFFTATFGIEATLKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQ
GLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFG
KNYTDNVDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLAT
VVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFIKWIKRNVLYLAK
MMRAKLTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADGELDAYRDKKSAKEINQLEVAI
GDGMEFTIHGDLKNKLKKGKLCMNNSKVIANSINHRDYRLDNDYINQNEEDTISNKSYGS
HKNRAFKDESHKGSMDSLDGEEKKDASKEDLEQEEDLGEEGEEGEGVLGDAIIQADEDPI
ESDYPADCCPENCYKKFPFLAGDDDAPFWQGWANLRLKTFQLIENKYFETAVILMILLSS
MALALEDVHLQQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKKYFTNAWCWLDFIIV
MVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLL
VCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSHEIIPDRNACLAENYTWENSPMNFDHV
GKAYLCLFQVATFKGWIQIMNDAIDSRELNKQPIRETNIYMYFYFVFFIIFGSFFTLNLF
IGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEI
VTDKKFDMIIMLFIGLNMLTMTLDHYQQTQTFSDVLDYLNMIFIVIFTSECLMKIFALRY
HYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIR
TLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKTFGQSMILL
FQMSTSAGWDGVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVISFLIVINMY
IAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSDFLDVLEPPLQI
HKPNKYKIVSMDIPICKGDMMFCVDILDALTKDFFARKGNPIEESAEIEVQTRPGEAGYE
PVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDADTDPRVRQTAVLVESDGFVT
KNGHRVVIHSRSPSVTSRTADV
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctgtatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcgaggctcgcatcgccgaggaacatgccaagcagaaggag
ctcgagaagaagagagcggaaggcgagggaggttttggacggaagaaaaagaaaaaagaa
gttcggtatgacgacgaggacgaggacgagggtcctcagccggatcagatgctcgagcaa
ggagcaccgattccggtccgactgcacaacgaatttccacccgagttggcctccacacct
ctcgaggatatcgatagcttctatcataaccaaaggaccttcgtcgtcatcagcaaggga
aaggacatattcaggttctcagcgacagatgcgatgtggatcctcgacccgttcaaccca
atacgacgtgtggccatttacatattggttcacccactgttctccctcttcattatcact
acaatattggttaactgcatactcatgatcatgcccactacgcccaccatcgagtctacg
gaagtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggt
ttcattctgcagccttttacctatcttagagatgcatggaattggctcgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctaggcaaccttgccgctctcaggaca
tttcgagtcctccgagccttgaagactgtcgctattgtaccaggtctgaaaaccattgtc
ggcgctgtgatagaatccgtgaagaacctgcgcgatgtgataatcctgacgatgttctct
ctttccgtctttgcgttgatgggcctccagatttacatgggggtgctcacgcaaaagtgt
ataaagaactttcccgaggacggctcctggggcaatctcaccgatgaaaactgggagcga
ttcgttagcaatgaaactaattggtacgtggacgaggcgaaaaacatgcctttgtgtgga
aattcatctggagcagggcagtgccttcctggctacacgtgtttacaaggatacggtgaa
aatccgaattatggttacacgagtttcgacacctttggctgggctctactctccgctttt
cgtttgatgacgcaagattattgggaaaatctgtatcaactggttcttagatcggccggt
ccatggcatatgttgttctttatcgtgatcattttcctcggctccttttatctggttaac
ttaatcctcgctattgtcgcgatgtcttatgacgagttgcaaaagaaagctgaagaagag
gaagctgccgaggaagaagccataagagaagccgaggaagcagctctagcgaaagagaat
aagctggcggcgcaggcggcggctcgggaggcggcagccgttgcggcggtggccgccgcc
gatcagatcgtcaaatcaccgtcagacttctcatgtcatagctatgaactgttcgttggt
caggaaaaagggaacgacgataacaacaaggagaggatgagcatacgttcgatcgagtca
gtcagcgagcatagagtgaaacagatcaacaatcacacggccaccactaaaccacgaaaa
gtcagcgctgtctctcgcgccgctaatggccagtttacttatgcctaccaggaaagcctg
cggaaggcgagtcttagcctgcctggctcaccgttcaatctccgtcgaagcagccgcggt
agccatcagttcacgatcagaaatggccggggccgtttcgtcggaccgccaggaggcgac
cggaagccgttggtcctgtcgacgttcctcgacgcccaggaacacctgccatacgcggac
gactcgaacgcggtcacgccaatgtccgaggagaatggcacgatcgtcgtgcccgtctac
tacgcgaatcttgggtccaggcactcgtcgtacacgtcacacgcatcacggctttcgtac
acgtcccatggtgatttgatcggtggaatagcaaacgcggggaaaccgatgacgaaggag
agccagctgagaatcagatctgtcaggccaccatccgtgaatggccatttcacggattct
aatcagaagtaccattacgagggtgatctagaagatcccatgggcaaggcaaagcaacaa
gacaatccgtttatagagccttcacaacaacatgccgtagttgatatgaaagacgtgatg
gtgctgaacgatatcatagagcaggccgcgggtcgacagagcagaacaccggagcaagga
gtttcgacctattactttccgacagacgacgatgaagaagggccaaagtttaaggacaaa
ttgttggccgcggtgctgcgttgcatcgatatcttctgcgtgtgggattgttgctggttg
tggcttgagtttcaaaaatacgtgtctcttgtggtgttcgatccattcgtagagttgttc
atcaccctttgtatcgtcgtcaatacattgttcatggcgctcgatcatcacgatatggac
aaggatatggaaaaagtgctcaagacaggaaactactttttcacggcaacattcggtatc
gaggcaacgctgaaactcatagcaatgagtccgaaatattactttcaagaaggatggaat
attttcgacttcattatcgtcgctctttcgcttctggagttgggattagaaggtgtccag
ggtctctccgtattgcgatcgttcagattgttaagagtgttcaaactggcgaagtcgtgg
ccaacgttgaatctgctaatttccatcatgggcagaacagtaggcgcgctgggtaacctg
acgttcgtgttatgtatcatcatcttcattttcgccgtgatgggtatgcaactgtttgga
aagaactatacggacaacgttgatcggttccccgatggagatctaccgagatggaatttc
accgattttatgcattcgttcatgatcgtgtttcgcgtactctgtggagagtggatcgag
tctatgtgggattgtatgcttgtgggagacgtctcttgcataccattctttctggctact
gttgtcatcggtaatctggttgtgctgaatctcttcttggctttgttgctgagcaacttc
ggttcgtcgaatctatcggcgccgaccgcggacaacgatacgaacaagatcgcggaggcg
atcgatcgaatagcacgatttattaagtggatcaagcgaaatgtcctttatcttgctaaa
atgatgcgagccaaactcaccaatcagatatccgatcaggcgccaggtgagggaccgtcc
aacagttggaaagaagatggaattgatcgcgatggggacctagatcttgcagatggcgag
ctggatgcgtatagagataaaaagagtgccaaggagataaaccaactcgaagttgctatc
ggagatggaatggaatttaccatccatggagacctaaagaataaattgaagaagggtaaa
ctgtgcatgaacaacagcaaagttatagcaaattcgataaaccatcgtgactacaggctg
gacaacgattatattaatcagaacgaggaagataccatcagtaataaatcatatggcagc
cacaagaatagagcgttcaaggacgagagtcataagggaagtatggactcgttggatggg
gaagaaaagaaggatgcgagtaaagaagacctggaacaagaagaagatcttggagaagag
ggagaggagggagaaggcgtcctgggggatgcaattatccaagcagacgaagatcccatc
gaatccgactatccggctgactgttgtccagaaaattgttacaagaaattcccgttctta
gctggtgacgatgacgctccattttggcagggttgggccaatttgagactgaagaccttc
caactaattgagaacaagtattttgagactgccgtcattttgatgatccttttgagtagt
atggctctcgccttggaagatgtgcatcttcaacaacgacccattctgcaagatatctta
tactacatggaccgaatatttactgtgattttcttcctcgaaatgttaatcaaatggttg
gctctcggcttcaaaaagtacttcacgaacgcttggtgctggcttgatttcatcattgtc
atggtgtcactcattaacttcgtagcgtcgctctgtggcgctggcgggatccaagccttc
aaaacaatgaggaccctaagggccctaaggccactcagggcgatgtctagaatgcaggga
atgcgggtagtcgtcaacgctttggttcaagccattccatccattttcaacgtgttactg
gtgtgtcttatcttctggttgatcttcgccattatgggtgtacagctttttgccggcaaa
tatttcaagtgcgtagatgcgaataaaacaacactcagccacgaaataatccctgaccga
aacgcctgtttggctgagaactatacctgggagaattctccgatgaatttcgaccacgta
ggaaaggcttatctgtgcttgttccaagtggccacgtttaaaggatggattcagatcatg
aatgacgcgatagattctagggagctcaacaaacaaccaattcgtgaaacaaacatctac
atgtatttctattttgtattcttcattatattcggatcgttttttacccttaatctattc
attggtgtgatcatcgataacttcaacgagcagaagaaaaaggcgggtggttccctcgag
atgttcatgacggaagaccagaagaaatattacaacgctatgaaaaagatgggtagcaag
aaaccattgaaagccattccacgtccaagatggaggccgcaggcgatagtgtttgaaata
gtgacggacaaaaagttcgatatgataatcatgttgttcatcggactgaatatgcttacg
atgacgttggaccactatcaacaaactcagactttcagcgatgttctggactatctaaac
atgatattcattgtgatattcaccagcgagtgtctcatgaagatcttcgctctgcgttac
cactatttcaaggagccatggaacctctttgattttgttgttgttatattgtcaatatta
ggtctggttctcagcgatattattgagaaatatttcgtatcgccgaccttgctccgtgta
gtaagggtggcaaaagtcggtcgtgtgcttcgactcgtgaaaggtgctaagggtattcga
actcttctcttcgccctggcgatgtcgttaccagctctcttcaatatttgcctattactg
tttttggtgatgtttatcttcgcgatttttggaatgtcattcttcatgcacgtgaaagac
aagagcggactggatgatgtatacaatttcaaaacgttcggccagtcgatgatattgcta
ttccagatgtcaacgtctgccggttgggatggcgtcctcgacggtataataaatgaggag
gactgccaggaaccgaacaacgagataggatatccgggcaactgtggttcgtccacgatc
ggcatcgcctatcttctctcgtacctggtgatcagtttcttgatcgtgataaacatgtac
atcgccgtgatcttggagaattactcccaagctaccgaggatgtgcaggagggtctgacg
gatgacgactacgacatgtactacgagatctggcaacagttcgacccagatggaacgcag
tacatcagatacgatcagctgtccgatttcttggacgtgctggaaccgccgttacagata
cacaagccaaacaagtacaagatcgtatctatggacatcccaatatgcaagggggatatg
atgttctgcgtagacattctggatgctctcacgaaagacttcttcgcgcgcaagggtaat
ccgatcgaggagtcggcagagatcgaggttcagacgcgtccaggtgaggctggttacgaa
ccagtttcctcgactctgtggcgtcagcgtgaggagtattgcgcgcgtctgattcagaac
gcctggagaaagcacaagcaacaacgtctaggcggaccaagcgaagaaagcgacgacgct
gacaccgatccacgggtcagacaaaccgcggtcttggtcgagagcgacggtttcgtgacg
aaaaatggccacagagtcgtcatacatagccgatcgccgagcgtaacctcgagaaccgcg
gacgtctga
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