Beta vulgaris (sugar beet): 104887062
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Entry
104887062 CDS
T03548
Name
(RefSeq) exosome complex component RRP45B
KO
K03678
exosome complex component RRP45
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104887062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104887062
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104887062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Pox_F17
Motif
Other DBs
NCBI-GeneID:
104887062
NCBI-ProteinID:
XP_010669943
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All DBs
Position
2:complement(24270150..24287142)
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AA seq
461 aa
AA seq
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MMEQRLANTWHISVNEKKFIETALLSDLRADGRRPFDFRELTIKFGREDGSSEVQLGQTH
VMSFVTAQLVQPYRDRPNEGSLAIFIELSPMADPSFEAGRPGEVAVELGRMIDRGLRESR
AVDTESLCVLTGKLVWSVRVDLHIIDNGGNLLDAANIAALAALMTFRRPECTLGGGEDRQ
KVVVHPPEVHEPLALIVHHLPIAVTFAFITEDNILVIDPTYYEEAIMKGRMTVTVNANED
VCAIQKAGDVGIPPGVVMQCLRIASVKAADITNKIENAVKLCNTDRERHSVKRISSVAGL
SINPPNSSAGDKKSHSNCERTAAWQQTRKSPSQERRFSESNDMKTEEPSYNGKANSSHNE
ARKFMKGPSCWDPFSKGVDAKHLKASLVSCGESVARKEKKQIVEGHLLDLEVNSAERAEK
RNLLAPSDHDVELHSREIKTLKDAVKPKNKRKIHLSVSDTS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcagaggctagctaatacttggcacatatctgtaaatgagaagaagttcata
gagactgcattgctttcagatcttagagctgatggacggcgcccatttgacttccgtgaa
ttaacaattaaatttggtagagaagacggatcatctgaggtacagcttggccagacgcat
gtcatgagctttgtcactgctcagctagttcaaccttatagagacaggcccaacgaagga
tcacttgctattttcatagagctgtcacccatggctgatccatcatttgaggccggtcga
ccgggggaggtagctgttgaattgggacgcatgatagaccgtggtctgagggagagcagg
gcagttgatacagaatcactttgtgtcctgactggcaagttagtttggtctgtccgtgtt
gatcttcacattattgataatggaggaaatcttcttgatgctgcaaatattgctgctctg
gcagctcttatgacatttcgacggcctgaatgtacacttggaggaggagaagacaggcag
aaagtagtggtacatccgccggaggtgcacgaaccacttgcattgatagttcaccatctt
cctatagcagtgacatttgcgtttattactgaagacaacatattggtaatagatccaacc
tattatgaagaggccataatgaagggaagaatgactgttacagttaatgcaaatgaagat
gtctgtgctattcaaaaggctggagatgttggtatccctccgggtgtagttatgcagtgt
ttgcgaattgcttccgtgaaggctgctgatataacaaacaagattgaaaacgctgtcaaa
ttgtgcaacactgatagagaacgtcacagtgtcaagcgcatatcttctgttgcgggattg
agtataaatccaccaaattcaagtgcgggggataaaaaaagtcattctaattgtgaaaga
acagcagcatggcagcagacgaggaagtcaccatctcaagaacgtcgttttagtgaaagc
aatgatatgaaaactgaagaaccttcatataatgggaaggcgaattcaagtcataatgaa
gctcgaaagttcatgaagggtccttcatgttgggatccattctccaaaggcgtggatgca
aaacatctgaaagcttctcttgtctcttgtggtgaatcagtggcaaggaaggagaaaaaa
caaattgttgaaggccatctattggacttggaggtgaattctgcagagagagccgaaaaa
aggaaccttttagcaccatctgatcatgatgtggaattacattctcgtgagattaagacc
cttaaggatgctgtgaaacccaagaacaagaggaaaattcatctttctgtttcagacaca
agttga
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