Beta vulgaris (sugar beet): 104888002
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Entry
104888002 CDS
T03548
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104888002
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104888002
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104888002
NCBI-ProteinID:
XP_010671109
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Position
3:complement(1915697..1918527)
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AA seq
426 aa
AA seq
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MTTLCLLIQYTNMLLQILEKRAMHHLFLFLFTVLSFPTFIQSIHVPNPQVIAQQVQEAIN
VSRRNLATNSCKTGNPIDDCWQCDKNWDENRQQLADCAIGFGKNAVGGKKGKIYIVKDPS
DDAINPKRGSLRYGVIQNEPLWIVFAKDMVIKLQQVLLINSFKTIDGRGANVHIADGACI
VIEDVNNIIIHGIHIHDCKRGGIGYVRYTPTHYGWRSKSDGDGISIISSRHIWVDHCSLS
RCTDGLIDAIRGSTAITISNNYMSHHNKVMLLGHNDNHKQDKNMQVTIAYNHFGEGLVQR
MPRCRHGYFHVVNNDYTKWEMYAIGGSAEPTINSQGNRFLAPDNRFTKEVTKRENAVEKE
WKKWNWRSEGDLFLNGAKFVNSGNESSLLYAKAMSLSARPASLVASMTKKAGVLICHKNR
TCSSIN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacaactttgtgtctcctaattcaatataccaatatgctactccaaatcctagaaaaa
agggcaatgcatcacttgtttcttttcttgttcactgtcctatcttttcccacctttatt
caatcaattcatgttccaaatcctcaagtaatagctcaacaagtgcaagaggctatcaat
gtgtctaggagaaatttggccacaaactcgtgcaagaccggtaatcctatcgacgattgc
tggcaatgtgacaagaattgggacgaaaatcgccaacaattagctgattgtgccataggt
tttggtaagaatgctgtaggaggtaaaaagggcaaaatctatatagtaaaagatcctagt
gatgatgctattaaccctaaaagaggctcattaagatatggagtcattcaaaatgaacca
ttatggatagtttttgctaaggatatggtgatcaaacttcaacaagttttgttgattaat
tccttcaaaaccattgatggaagaggagctaatgtgcatattgctgatggagcatgtata
gtcatagaagatgtaaacaacatcatcatacatggcatacacatacatgattgcaaaaga
ggaggtattggttatgtgaggtacaccccaactcattatggttggagaagtaaatcagat
ggtgatggaatatccatcatttcgtcacgccatatatgggtggatcattgctctctatct
agatgcactgatggcttgattgatgccattcgtggctcgaccgcgataactatatctaac
aactacatgagccatcataacaaggtcatgctcttagggcataatgataatcataaacaa
gataagaacatgcaagttactatagcttataatcattttggagaaggccttgttcagaga
atgccaaggtgtagacatggatattttcatgtggtgaataatgactacacgaaatgggag
atgtacgctattggaggaagtgcagaaccaactatcaatagtcaaggcaacagattccta
gctcctgacaaccggttcactaaagaggtaactaaacgagaaaatgcagtagaaaaagaa
tggaagaaatggaattggagatcagaaggggatttatttttgaatggagcaaaatttgta
aattctggaaatgaatcatccttactatacgctaaggccatgagcttaagtgcacgacca
gcttcactagtggcttcaatgacaaagaaagcaggtgtactcatatgtcacaaaaacaga
acttgctcatcaattaattaa
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