Beta vulgaris (sugar beet): 104897969
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Entry
104897969 CDS
T03548
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104897969
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104897969
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104897969
NCBI-ProteinID:
XP_010683248
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Position
6:complement(59956317..59959209)
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AA seq
444 aa
AA seq
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MEKQLALFLLLCSLSYLVLAFAENITLESKKYWDMREEEAKKRTVEAYHPQPFNVTNHLN
FRARILQSKWLESDVGTNGTRRVLAKKYRKGCMFANPIDACWRCQPDWEKKRRRLAKCAL
GFGKGTTGGKAGRKYLVTDPSDDDMLNPKPGTLRHAVIQNQPLWIVFGKPIMRIKLKQEL
IMTSHKTIDGRGSHVIIEGGAGITIQFVENIIIHGIKFRNIVPRPGGLIRDSLTHFGLRT
PSDGDAISIFGSHHIWIDHCSFSRCYDGLIDVIKGSTAITISNCHMTDHDKVFLFGASDQ
HSEDRKMQITIAYTHFGKGLVQRMPRCRLGFFHIVNNDYTHWLMYAIGGGMNPTIISEGN
RFIAPPDLRAKEVTHRQKPNSAWDSGTWISHGDMLVNGATFQQSPSILQLRPYAGKMVFP
MSGKYAGRATKHAGPLKCIPRRRC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaattagctttgtttctcctcctatgttctttgtcttatctcgtcttggct
tttgcagaaaatattactttggaatcgaagaagtattgggatatgcgtgaagaagaagcc
aagaagagaaccgtggaagcctaccatcctcaaccttttaatgtcacaaaccaccttaac
tttcgtgctcgaatattacaaagcaagtggctagaaagtgatgtaggaacaaacggcaca
aggagagtattagcaaagaagtacagaaaaggttgcatgtttgctaatcccatcgatgca
tgttggagatgccaacctgactgggagaagaagaggcggcggctagcgaagtgcgcattg
gggttcggaaaaggcacaacaggaggcaaagctgggcgcaagtacttggtgacagacccc
tcagatgatgatatgttgaaccctaaacccggaaccctacgccatgcagtcattcagaat
caaccactatggattgtgtttggcaagcctataatgagaattaagctcaagcaagagctt
attatgactagccataagaccatcgatggtaggggttcacatgtgattattgaaggtgga
gctgggattactatacaatttgtagagaatatcattattcatgggattaagtttaggaac
atagtccctagacctggaggactaattagggattcacttacacatttcggattaaggact
ccgagtgatggggacgccatctctatatttggttcacatcatatttggatcgatcattgc
tcgttctcaaggtgctatgatgggctcattgatgtcatcaaaggctcgaccgccattacc
atctccaactgccatatgactgatcatgacaaggtctttttgtttggtgcatctgaccag
cattctgaagataggaaaatgcaaataacaattgcatacactcattttgggaaaggattg
gtacaaaggatgccaaggtgcagattaggattctttcatatagttaacaacgattatact
cactggctcatgtatgccattggtggtggtatgaacccaaccatcatcagcgaaggcaac
cgattcatagctcctccagacctaagagctaaagaggttacacacagacaaaaacccaat
tcagcatgggatagtgggacatggatttcacacggagatatgttggtgaatggtgccacc
ttccaacagtcgccctccattcttcaactacgcccatacgccggtaagatggtatttccg
atgtcgggaaaatacgctggacgtgcaaccaaacatgcaggaccattgaaatgtatacct
agacgacgttgctga
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