Beta vulgaris (sugar beet): 104904537
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Entry
104904537 CDS
T03548
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104904537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104904537
Enzymes [BR:
bvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
104904537
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
104904537
DNA repair and recombination proteins [BR:
bvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104904537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
104904537
NCBI-ProteinID:
XP_010691110
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All DBs
Position
9:complement(39843566..39852205)
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AA seq
416 aa
AA seq
DB search
MPELPEVEAARSAIAEHCIGKKIMKAIIADDSKVIVDVSRSEFESSLLNKTIVAAHRKGK
NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDADEWPSKYSKFFIELHDGLEI
SFTDKRRFAKVRLLDDPASVLPISGLGPDALLEPMTEGEFFNSMSKKKIAIKPLLLDQNF
ISGIGNWVADEVLYQARIHPSQVASSLSKDESARLLKCIKEVLEKAVEVGADNSQYPSNW
ISHSREKKPGKAFVDGKKIDFITSGGRTTAYVPELQKLRGVQATKAPAKQTSKKKKDDDN
NNEEHDDNGHDNGDGREEEMENVKSKQTKNGTSGKQTPRRKKSTKDDDVDDKEDDNDDVR
DDKTTRTRDSRVSAKRKSQGMDANKSEKSSGRKKATSKSKSRKSNDSDDSDDRNDE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcttccggaggtagaagcggcaaggtccgccatagctgaacactgcataggt
aagaaaatcatgaaggcaattatagcagatgattctaaggtcattgttgatgtctctcgc
tccgagttcgaatcctctctcctcaacaaaaccatcgttgctgctcatcgcaaaggcaag
aacatgtggcttcaacttgattcgcctccttttccttctttccaatttgggatggctggt
gctatatatatcaagggtgtggcagttacgaagtataaaagatctgctgtaaatgacgcg
gacgaatggccctcaaagtactccaagttcttcattgaactacatgatggtctggagatt
tctttcacagacaagaggcggtttgctaaagttcgcctgctggatgatccagcttctgtt
ctaccaatatctgggcttggtcctgatgctttattggaacccatgactgaaggggagttc
tttaattccatgagcaaaaagaagattgctattaagcctttattgctcgatcagaatttt
atttctggcatcgggaattgggttgcagatgaagttttatatcaagcaagaattcatcct
tcacaagttgcttcttccctctcaaaagacgaaagtgccagactactgaagtgtattaaa
gaggtacttgagaaggctgttgaggttggggccgataatagtcaatatccaagtaattgg
atttcacattcacgggaaaaaaagcctggaaaggcttttgttgatggaaagaagatcgac
tttatcacttcaggtggaaggacgacagcttatgtaccagagcttcaaaagctaagggga
gtgcaagccacaaaagctcctgctaaacaaacttctaaaaagaaaaaggatgatgataac
aacaatgaagagcatgatgataatggtcatgataatggggacggcagggaagaggaaatg
gaaaatgttaaatctaagcaaacgaagaatggcacaagtggaaagcaaacacctagaagg
aagaaatccactaaggacgatgatgttgatgataaggaggatgataatgatgatgtgaga
gatgataagacaaccagaactcgtgatagtagggtttcggcaaagaggaaatcacaagga
atggatgcaaacaagagcgagaaatcgagtgggagaaagaaggctacatccaagtcgaag
tctaggaaaagcaacgattctgatgatagtgatgatcgaaatgatgagtga
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