Beta vulgaris (sugar beet): 104908556
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Entry
104908556 CDS
T03548
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg00040
Pentose and glucuronate interconversions
bvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104908556
Enzymes [BR:
bvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104908556
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104908556
NCBI-ProteinID:
XP_010695977
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Position
7
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AA seq
406 aa
AA seq
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MANYAMLFFLFSLFAPSFVLSSPTVASDPELVVHEVHRSINESIARRSLGYLSCGTGNPI
DDCWRCDPNWHENRQRLADCAIGFGKNAIGGKNGRIYVVTDSGDDDPVNPKPGTLRYGVV
QDEPLWIIFQRDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIH
DCKQGGNAMVRSNPHHYGWRTISDGDGVSLFGASHVWVDHCSLSNCADGLIDAIMGSTAI
TISNNFMTHHDKVMLLGHSDSYTADKNMQATIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFLAPDRRFSKEVTKHEDAPENEWKNWNWRSEGDLMLNG
AFFTPSGAGASASYARASSLGARPSTLVGSITAASGALNCRKGARC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactatgcaatgttgttcttcttattttctctttttgctccttcctttgttctt
tcttcaccaacagttgcttctgatcctgaacttgtagtacatgaggtacataggagtatc
aatgagtcaattgctaggagaagcttggggtacctctcttgtggaacaggaaaccccatt
gatgattgctggaggtgtgatccaaactggcacgagaaccgccagcggctagctgattgc
gcaattgggtttggtaagaatgccattggaggtaaaaatgggcgcatttacgtggtgacg
gactctggtgacgatgatccggttaacccgaaaccaggtacccttaggtatggtgtggtc
caagatgagccattgtggatcatattccaaagggacatggtaatcagattgaaagaagaa
ttaatcatgaactccttcaagacaattgatggcaggggagctagtgtccacattgctggt
ggaccatgtattaccatacaatatgtgaccaacatcatcatacatggaattaacatacat
gattgtaagcaaggtgggaatgctatggtgaggagcaacccacatcattatggatggagg
acgatatcggatggtgatggagtgtctctctttggtgctagccatgtctgggtagaccat
tgttctctgtcaaactgtgctgatggattgattgatgccatcatgggttctactgccatc
accatttctaacaatttcatgactcatcatgataaggtcatgttgttaggtcatagtgat
tcatatactgcagacaagaatatgcaagccaccattgcttttaaccattttggtgaaggt
cttgttcagaggatgccaagatgtagacatggatacttccatgtggtaaacaatgactac
acccattgggaaatgtatgccataggtgggagtgctaaccctaccatcaatagccaaggc
aacagatttttagcacctgatagaagattcagcaaagaggtgactaaacacgaggatgcc
ccagaaaatgaatggaagaattggaattggaggtcagaaggtgacctaatgctgaatggt
gcattttttacgccgtcgggtgctggtgcttcagcaagctatgcaagggcctcaagcttg
ggggctaggccatcaactcttgttggctcaattactgctgcttctggtgcacttaactgc
aggaagggtgctcgctgctga
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