Bacillus vallismortis: B9C48_18535
Help
Entry
B9C48_18535 CDS
T04948
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bvm
Bacillus vallismortis
Pathway
bvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9C48_18535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvm03019
]
B9C48_18535
03009 Ribosome biogenesis [BR:
bvm03009
]
B9C48_18535
Enzymes [BR:
bvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9C48_18535
Messenger RNA biogenesis [BR:
bvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9C48_18535
Ribosome biogenesis [BR:
bvm03009
]
Prokaryotic type
rRNA helicases
B9C48_18535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
UvrD-helicase
NAT10_TcmA_helicase
Flavi_DEAD
3H
Motif
Other DBs
NCBI-ProteinID:
ARM29714
LinkDB
All DBs
Position
complement(3746536..3747975)
Genome browser
AA seq
479 aa
AA seq
DB search
MNEFNEYAISPEIRRALNGLQYTEPTEVQRRVIPAALQKKDLVVKSQTGSGKTAAFGIPI
CELAEWEENKPQALILTPTRELAAQIKEDITNIGRFKRIKATAVFGKASFDKQKTELKQK
SHVVAGTPGRVLDHIEKGTLPLERLAYVVIDEADEMLNMGFIEQVEAIIQHLPKNRVTML
FSATLPDDVEKLSRTYMKDPELIEVKAEGLTTKDIEHFVTRTEEEDKTSLLRDVLITENP
DSCIIFCRTKERVIQLTDELDRLGYPCDKIHGGMVQEDRFDVMNEFKRGEFRYLIATDVA
ARGIDIENISLVINYDIPLEKESYVHRTGRTGRAGHRGLAVTFVTPSESRFLNDIETYIG
FRIQKREAPSEKETAERKAAFAEKLNARPDVKTDKSEQLNKDIMKLYFNGGKKKKLRAVD
FVGTIAKIDGVSADDIGIITILDNASYVEILNGKGPHVLDIMKNTTVKGKKLKVHKAKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtttaatgaatatgcgatcagccccgagatccgacgggcgctgaatggcttg
caatacaccgagccgactgaagtgcagcggcgcgtcatccccgccgcgctgcaaaaaaaa
gacctcgtcgtcaaatcgcagacgggcagcggcaaaaccgcggctttcggcattccgatc
tgtgagcttgcggagtgggaggaaaacaaaccgcaggcgctgattttaacgccgacccgc
gagcttgcggcgcagattaaagaagatatcacgaatatcggccgtttcaaacggataaaa
gccacggcggttttcggaaaagcttcttttgacaaacagaaaaccgaactgaagcaaaaa
agccacgtcgttgccggaacgccggggcgtgtgcttgatcatatagagaaagggacgctg
ccgcttgaacggctggcgtatgtagtgattgacgaagcggatgaaatgctgaatatggga
tttattgaacaggtggaagccatcattcagcatctgccgaaaaacagagtcaccatgctg
ttttcagcgacgctgccggatgacgtcgagaagctgagccgcacatatatgaaagaccct
gaattgattgaagtaaaagcggaaggcctgacgacaaaagacattgagcattttgtcacc
agaacagaagaagaggacaaaacatccttgctgcgagatgtcctgatcaccgaaaacccg
gacagctgcatcatattctgccggacaaaagaaagagtcatccagttaaccgatgagctg
gacaggctgggctacccttgcgataaaattcacggcggcatggtgcaggaagaccgcttt
gacgtcatgaatgaattcaagcgcggcgagttccgctatctcattgcgaccgatgttgcc
gccagaggaattgatattgaaaacatcagcctcgtcatcaattatgatattccgcttgaa
aaagaaagctatgtacaccgcaccggcagaacgggccgcgccggacaccgcggactggcc
gttacgtttgtgacaccgtctgaatcgcggtttctgaatgacattgagacatatatcggt
ttccgcatccagaagcgggaggcgccgtctgagaaagaaacagcggaacggaaagcggct
tttgcggaaaaattgaacgcccgccccgatgtcaaaacagacaaaagcgaacagttaaac
aaagacatcatgaagctgtactttaacggcgggaaaaagaaaaaactcagagcggtcgat
tttgtcggaacgattgcgaaaatcgacggcgtttcagccgatgatatcgggattatcacg
attttggacaacgcatcgtacgtcgaaattctgaacggcaaaggcccgcacgttcttgac
atcatgaaaaatacgacggtcaaaggcaaaaaactgaaagtccataaagccaagaaataa
DBGET
integrated database retrieval system
