Phocaeicola vulgatus: BVU_0812
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Entry
BVU_0812 CDS
T00546
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BVU_0812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvu03021
]
BVU_0812
03400 DNA repair and recombination proteins [BR:
bvu03400
]
BVU_0812
Enzymes [BR:
bvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BVU_0812
Transcription machinery [BR:
bvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BVU_0812
DNA repair and recombination proteins [BR:
bvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BVU_0812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ABR38516
UniProt:
A6KYK2
LinkDB
All DBs
Position
complement(1107511..1111797)
Genome browser
AA seq
1428 aa
AA seq
DB search
MAFRKETKIKSNFSKISIGLASPEEILENSSGEVLKPETINYRTYKPERDGLFCERIFGP
VKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDAIVYYERYVVIQPGVKAEDGINKYDLLSEEEYLDILDTLPKENQYLED
TDPNKFIAKMGAEAIYDLLSTLDLDALSYELRHKASNDSSQQRKNEALKRLQVVESFRAS
RGRNKPEWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAP
EVILRNEKRMLQEAVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPELKMGECGIPKLMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEPVI
WDILEHVMKGHPVLLNRAPTLHRLGIQAFQPHMIEGKAIQLHPLACTAFNADFDGDQMAV
HLPLSNDAILEAQMLMLQAHNILNPANGAPITVPAQDMVLGLYYITKLRKGAKGEGLTFY
GPEEALIAYNEGKVDIHAIVNVVVKDLDKDGKIVDVMMKETSVGRVIVNEIVPAEVGYLN
TIISKKSLRDIISDVIKAVGVARACEFLDGIKNLGYYMAFKGGLSFNLGDIIIPKEKEEL
VKRGNEEVEQIMMNYNMGFITDNERYNQVIDTWTHVNSDLSDILYKTIKNDDQGFNSVFM
MLDSGARGSKEQIRQLSGMRGLMAKPQKAGAEGAQIIENPILSNFKEGLSVLEYFISTHG
ARKGLADTALKTADAGYLTRRLVDVSHDVIINEEDCGTLRGLVCTALKNNDEVIATLYER
ILGRVSVHDIVHPTTGKLIVAGGEEITEDIAQEIEDSPIESVEIRSVLTCESKKGVCAKC
YGRNLASSRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGIAGNMAANASIVAKNNARL
EFEELRTVDTVDEMGEAVKVVVGRLAEVRFIDVNTGIILSTHNVPYGSKLYAADGDIVEK
GKLIAKWDPFNAVIITEATGKIEFESVVENVTYKVESDEATGLREIIIIESKDKTKVPSA
HIVTEDGNLIRTYNLPVGGHVVVENGQAVKAGDIIVKIPRAVGKAGDITGGLPRVTELFE
ARNPSNPAVVSEIDGEITMGKIKRGNREIIVTSKTGEVKKYLVNLSKQILVQENDYVRAG
TPLSDGAITPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEIIVRQMMRKVEID
EPGDTRFLEQQVVDKQEFMEENDRIWGKKVVVDSGDSQNLQPGQIVTARKLRDENSMLKR
RDLKPVEVRDAIPATSTQILQGITRAALGTSSFMSAASFQETTKVLNEAAINGKVDRLEG
MKENVICGHLIPAGTGQREFEKIIVGSKEEYDRILANRKNVLDYSEVE
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggcttttagaaaagaaactaagataaagagtaatttctcgaaaatctcaattggcttg
gcttcacccgaagaaatccttgagaattcgagcggtgaggtgttgaagcctgaaacgatc
aactaccgtacctacaaaccggaacgtgatggtttgttctgcgagcgtattttcggtccg
gtgaaagattacgaatgtcattgcggtaagtacaaacgtatccgttataaaggtattgtt
tgtgaccgatgtggcgttgaagtgactgaaaagaaggtccgtcgtgaacgtatgggacat
attcagttagttgtgcctgtagcgcatatctggtattttcgttcattgccgaacaagatc
ggttatttgttggggctgcctacaaagaaactagacgctattgtatattatgaacgttat
gtggttatccagccgggtgtgaaggctgaagatggcattaataaatatgatttgctttct
gaagaagagtatttggatatcttggatacacttcctaaagaaaaccaatatttggaagat
acagatccgaataagtttatagctaagatgggagcagaagccatttatgatctgctctca
actttggatttggatgctttatcttatgaattacgtcataaagcaagtaatgattcttcg
cagcaacgtaagaacgaggctttgaagcgtctgcaggtagttgaatcgttccgtgcatct
cgcggacgtaataaacctgaatggatgattgtacgtattgtgccggttattcctcctgaa
ctgcgtccattggttccgttggatggtggccgtttcgctacctctgacttgaatgacttg
tatcgtcgtgtgattatccgtaacaaccgtttgaagcgactgattgaaatcaaggctccc
gaagtgattttgcgtaacgaaaaacgtatgttgcaggaggctgtcgattccttgttcgat
aactcacgtaaatcaagtgcagtgaagactgacgctaatcgtccattgaaatcactgtcc
gatagcttgaagggtaagcaaggacgtttccgtcagaacttgctgggtaagcgtgttgac
tactctgctcgttcggttatcgttgttggtcctgaattgaagatgggtgaatgtggtatt
cctaaactgatggctgcagagctttacaagccgtttatcatccgtaagttgattgaacgt
ggtattgtgaagactgtaaaatctgcaaagaagattgtagaccgcaaggagcctgtgatc
tgggatatcttggaacatgtcatgaaaggtcatcctgtattgctgaaccgtgcgccgact
ctgcaccgtttgggtattcaggctttccaaccgcatatgattgaaggtaaagctattcag
ttgcacccgttggcttgtacagcgttcaatgccgacttcgatggtgaccagatggcggtt
cacttgcctttgagtaatgatgcgattctggaagcacagatgttgatgcttcaagctcat
aacattctgaatcctgctaatggtgctcctattactgtgcctgcacaggatatggtactt
ggtttgtattatattaccaagctgagaaaaggggctaaaggtgaaggcttgactttctac
ggtccggaagaggctttgattgcttataatgaaggtaaagtggatattcatgctatcgtc
aacgtagtggtgaaggacttggacaaagatggcaaaatcgtagatgtgatgatgaaagaa
acctccgtagggcgtgtgattgtaaatgaaatcgttccagcggaagtggggtacttgaat
accattatttccaaaaagtctttgcgagatatcattagtgatgttatcaaagctgtcggt
gttgcacgtgcttgtgaattcttggatggtattaagaacttaggttactatatggcgttc
aagggtggtctgtcattcaacttgggtgatattattatcccgaaagaaaaagaagaactg
gtaaaacgtggtaatgaggaagtggaacagattatgatgaactataatatgggtttcatt
actgacaatgaacgttataaccaggttatcgatacatggactcacgtgaacagtgacctg
tctgatatactttacaagacgattaagaatgatgaccaaggcttcaattcagtatttatg
atgcttgattccggggcccgtggttctaaagagcagattcgtcagttgtctggtatgcgt
ggtttgatggcaaaaccgcagaaagccggtgctgaaggcgcacagattattgaaaaccct
attctttcaaactttaaagaaggtttgtctgtgttagagtattttatttctacccacggt
gctcgtaaaggtttggcggatacagcgttgaagactgctgatgcgggatacttgacccgc
cgtctggtagacgtgtcgcatgatgtgattatcaatgaagaagactgtggaacacttcgt
ggtttggtttgtacggctttgaagaataacgatgaagttattgctactttgtacgaacgt
attctaggacgtgtttctgtacatgatatcgtccatcctactactggtaaactgattgta
gccggtggagaggagattacagaggatattgcgcaggaaatcgaggattctccgattgaa
agcgttgaaatccgttcggtattaacttgtgaatctaagaaaggggtatgtgctaagtgt
tatggacgtaacttggcatccagtcgtatggttcagaaaggtgaagcagtcggcgtaatc
gctgcccaatctattggtgagccgggtacacagttgacattgcgtacattccatgccggt
ggtatcgcaggtaatatggctgctaatgcaagcattgtggccaagaataatgcacgtttg
gaattcgaagaattgcgtacggtagatacggttgatgaaatgggtgaggctgtgaaagtg
gtagtcggtcgtttggctgaagtccgctttatcgatgtgaatacagggattatcctgtca
actcataatgtgccttatggttcaaaattatatgctgcagacggtgatattgttgagaaa
ggaaaactgattgctaagtgggatccgttcaacgctgttattattacagaggctactggt
aagattgaattcgagagtgtggttgaaaacgtaacttataaggtagagtctgatgaagct
accggtttgcgtgaaattatcattatcgagtctaaggacaagacaaaagtaccttctgcc
catattgtaaccgaggatggtaatttgatccgtacttataacttacccgtgggggggcat
gttgtggttgaaaacggtcaggcagtgaaagctggtgacattattgtgaagattcctcgt
gctgtaggcaaggctggtgatatcaccggtggtcttcctcgtgttacagaactgtttgag
gctcgtaacccatctaatcctgctgtcgtttctgaaatagacggtgaaattactatgggt
aagattaagcgtggtaaccgtgaaattattgtcacatctaagacaggtgaagtgaaaaag
tatttggtgaatctgtctaaacaaatattggttcaggagaatgactacgttcgtgccgga
actccgttatctgacggtgcgattactcctgctgacattttggccattaaaggtcccacg
gctgtacaggaatatatcgtaaatgaagtgcaagacgtttaccgtttgcagggtgtgaag
attaacgacaaacactttgagattattgttcgtcaaatgatgcgtaaggtagaaatcgat
gagccgggcgatactcgcttcttggaacagcaggtagtggataagcaagagttcatggaa
gaaaacgatcgtatttggggcaagaaagtagttgttgactctggtgattctcagaatttg
cagccgggtcagattgttactgcccgtaagttgcgtgatgagaacagtatgttgaaacgt
cgtgatttgaagcctgttgaagtacgtgatgctattcctgctacatctactcagattctg
caaggtattacccgtgccgctttgggaacttcaagtttcatgtctgctgcatcattccag
gaaacaacgaaagttttgaatgaggctgccatcaatggtaaggttgatagattggagggt
atgaaggagaatgtgatttgtggtcacttgattcctgccggtaccggtcagcgtgaattc
gaaaagattattgttggttcgaaggaagaatatgatcgcattcttgctaatcgtaagaat
gtactcgattatagtgaggtagagtaa
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