Phocaeicola vulgatus: BVU_1080
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Entry
BVU_1080 CDS
T00546
Name
(GenBank) putative ribonuclease H1
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVU_1080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvu03032
]
BVU_1080
Enzymes [BR:
bvu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BVU_1080
DNA replication proteins [BR:
bvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
BVU_1080
Prokaryotic type
Elongation factors (bacterial)
RNase H
BVU_1080
Elongation factors (archaeal)
BVU_1080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cauli_VI
RNase_H
Motif
Other DBs
NCBI-ProteinID:
ABR38771
UniProt:
A6KZA7
LinkDB
All DBs
Position
complement(1435449..1436075)
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AA seq
208 aa
AA seq
DB search
MAKKQKYYVVWKGVNPGVYDSWTDCQLQIKGYDGAQYKSFETKEEAEHALASSAFHYIGK
NAVKKEDTPKQLPENFDMNCLAVDAACSGNPGPMEYRGVYLLTGQEVFHFGPVYGTNNIG
EFLAIVHALALMKQKNISMPVYSDSRNALSWVKQKKCKTKLERTPQTEKLFQMIERAEIW
LKENKYTTPLLKWETDRWGEVPADFGRK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaacagaaatattatgtagtatggaaaggtgtcaatccgggagtttatgac
tcctggactgactgccagctacagataaaaggttatgatggcgcacaatacaagtcattc
gagaccaaagaggaggcggaacacgccttggcttcttccgcttttcattatataggcaag
aatgctgttaaaaaagaagatactcctaaacaacttcccgagaactttgatatgaactgc
ctggctgtggatgccgcttgcagtggaaatcccggaccgatggaatatcggggcgtttat
ttgcttacgggacaggaggtttttcatttcggtcctgtttatggaacgaataatattgga
gagtttcttgccattgtccatgccttggcattgatgaagcagaagaatatcagtatgcct
gtttactcggacagccgtaatgcgttgagctgggtgaaacagaagaaatgtaaaactaaa
ctagagcggactcctcagacggagaaactttttcaaatgatagaacgggccgaaatttgg
ctgaaagaaaataaatataccacacctttattgaagtgggaaaccgaccgatggggagag
gtcccggctgatttcggacggaaataa
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