Candidatus Blochmannia vicinus (nom. nud.): M9408_02680
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Entry
M9408_02680 CDS
T08509
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bvx
Candidatus Blochmannia vicinus (nom. nud.)
Pathway
bvx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M9408_02680 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvx03021
]
M9408_02680 (rpoA)
03400 DNA repair and recombination proteins [BR:
bvx03400
]
M9408_02680 (rpoA)
Enzymes [BR:
bvx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M9408_02680 (rpoA)
Transcription machinery [BR:
bvx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M9408_02680 (rpoA)
DNA repair and recombination proteins [BR:
bvx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M9408_02680 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
URJ32897
UniProt:
A0ABY4SUJ2
LinkDB
All DBs
Position
625894..626886
Genome browser
AA seq
330 aa
AA seq
DB search
MQNSATEFLKPRLVDIEQITKTRAKVTLEPLERGFGHTLGNALRRILLSSMPGFAVTEVE
IDGVLHEYTTKEGIQEDILEILLNLKKLAIRVEGKNNITLTLKKSGIGPVIANDISYDTD
LVKIITPDHIICHITDKNTSINMRIKVQCGRGYVPASARFNPESDILPIGRLLLDACYSP
VERISYNVEAARVEQRTDLDKLIIDMETNGTIEPEEAIRRAATILSEQLAAFIDLRDIHQ
PEHKEEKPEFDPILLRLVDDLELTVRSANCLKAESIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPSNILDG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactctgcaacagaatttttaaaaccacggttagtagatattgaacaaattact
aaaacacgtgctaaagttactctagagccattagaacgaggatttggtcatactttagga
aatgccctgcgtcgtattttactttcatcaatgcctggatttgcagtaacagaagttgaa
attgatggcgtattacatgagtacaccacaaaagaaggtatacaagaagacattttagaa
attttgcttaacctaaagaaattagctattagagttgaaggcaaaaataatattactctg
actttaaaaaaatctggtatcggtcctgtaattgcaaatgatatttcatatgatactgat
cttgtaaaaattattacaccagatcatattatatgtcatataaccgataagaatacatct
attaacatgcgtataaaagtacaatgtggtcgaggttacgtcccagcttctgctagattt
aatcctgaatcagatatcttaccaattggtcgattattattagacgcgtgttatagtccg
gtagaaagaatttcttataacgtagaagctgctcgtgttgaacaacgtacagatttagat
aaactaattattgatatggaaactaatggcactatagaacctgaagaagcaattaggcgt
gcagcaacaattttatccgaacaacttgcagcttttattgatttacgagatatacatcaa
ccagaacataaagaagaaaaaccagaatttgatccaattttattacgtcttgttgatgat
ttagaactaactgtccgttccgcgaattgtttgaaagcagaatctattcattatattgga
gatttagtacaacgaacagaagtagaattattaaaaactcctaatttagggaaaaaatca
ttaacagagataaaagacgtattagcttcccgtggattatctttaggaatgcgtttggaa
aattggcctccgtcaaatattttagatggttaa
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