Brevundimonas vancanneytii: NCTC9239_03113
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Entry
NCTC9239_03113 CDS
T06708
Symbol
pbpD
Name
(GenBank) Penicillin-binding protein 4 precursor
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
bvy
Brevundimonas vancanneytii
Pathway
bvy00550
Peptidoglycan biosynthesis
bvy01100
Metabolic pathways
bvy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC9239_03113 (pbpD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC9239_03113 (pbpD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bvy01003
]
NCTC9239_03113 (pbpD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bvy01011
]
NCTC9239_03113 (pbpD)
Enzymes [BR:
bvy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NCTC9239_03113 (pbpD)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NCTC9239_03113 (pbpD)
Glycosyltransferases [BR:
bvy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NCTC9239_03113 (pbpD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bvy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NCTC9239_03113 (pbpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
VTO19422
UniProt:
A0A4P1KGD1
LinkDB
All DBs
Position
1:3025267..3027306
Genome browser
AA seq
679 aa
AA seq
DB search
MARKDRGPDRNDQGGGKPRRTFMGRLFYWGAVLAVWGLIFAVVFFAVFARDLPDTSSLYE
VDRQPSITYLDRSGALIAVRGTQMAPPVDLDALPDYVPAAFVAIEDRRFYHHPGFDPIGM
SRAMASNLKAGRVVQGGSTITQQLAKNLFLTPDQNMKRKVQELMLAVWLEMKFSKKEILA
LYLNRVYFGAGAYGIESASQRYFDKSADKLTVGEAALLAGLLKAPSRYSPVSESERAATR
ANVVLNEMVEVGAITPAQREAAVAEPVRVSKTLASQHAQYFIDWLDKQIRGLVGEPTEDL
VVETTLDLTLQTDAERAVRRILDRDKGKGVEQAALVALDGDGRVRAMIGGASYGDSQFNR
AVDARRQSGSAWKPFVYLAAVEAGYTPETPVVDQPVTIGGWSPRNYSGRFSGQMTLAQAV
AQSTNTVAAYVADQVGRDSVARAARRLGISSEIGLQPSMALGAVEVSPLEMAQAYDAFAN
GGRRVDAYGISRIRTPSGRVIYTHGPSEGGQAINNPPLYYMNQMLRGVITSGSGRSAAIG
GRDIAGKTGTTSDYKDAWFVGYTGGFVAAVWVGKDDNKPMARVTGGSSPAAIWRGFMEAA
LPKLAVQAIPNGPPLPEGWIPPDPVGDLMGQVEDPYATAQPYEDAPPPVVIDGQAPQPQQ
PPAARPAPPQERQPDALFF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaaagaccgcggacccgacaggaacgatcagggcggaggaaaaccgcgccgg
accttcatgggccgcctcttctactggggcgcggtgctggccgtctggggcctgatcttc
gccgtcgtcttcttcgccgtcttcgcgcgcgacctgccggacacctccagcctgtatgag
gtcgatcgccagccctcgatcacctatctggaccgctccggcgccctgatcgcggtgcgc
ggcacccagatggcgccgccggtcgatctggacgccctgcccgactacgtccccgccgcc
tttgtggccatcgaggaccgccgcttctatcaccacccaggtttcgacccgatcggcatg
agccgcgccatggcctcgaacctgaaggccgggcgcgtggtccagggcggctccaccatc
acccagcaactggccaagaacctgttcctgacgcccgatcagaacatgaagcgcaaggtt
caggagctgatgctggccgtgtggctggagatgaagttctccaaaaaggagatcctcgcc
ctctatctgaaccgcgtctatttcggcgccggcgcctatggcatcgaatccgcttcgcag
cgctatttcgacaagagcgccgacaagctgacggtcggcgaggccgccctgctggcgggc
ctgctgaaggcgccctcgcgctattcgccggtatccgagagcgagcgcgccgccacccgc
gccaacgtcgtgctgaacgaaatggtcgaggtcggcgccatcaccccggcccagcgcgaa
gccgccgtggccgaaccggtgcgggtgtccaagaccctggccagccagcacgcccaatac
ttcatcgactggctggacaagcagatccgcgggctggtcggcgagccgaccgaagacctc
gtggtcgagaccaccctggacctgaccttgcagaccgacgccgagcgcgccgtgcgccgc
atcctggatcgcgacaagggcaagggcgtcgaacaggccgccctggtcgccctggacggc
gacggccgggtgcgcgccatgatcggcggcgcctcttacggcgacagccagttcaaccgc
gccgtcgatgcgcgtcgccagtccggctcggcctggaaacccttcgtctatctggcggcg
gtcgaggccggctatacgcccgagaccccggtggtcgaccagcccgtgaccatcggcggc
tggtcgccgcgcaactattccggccgcttctccggtcagatgaccctggcccaggccgtg
gcccagtcgaccaacaccgtcgccgcctatgtcgccgatcaggtcgggcgcgacagcgtg
gcccgcgccgcacgccgtctggggatctcgagcgagatcggcctgcagccgtccatggcc
ctgggcgccgtcgaggtcagcccgctggagatggcccaggcctatgacgccttcgccaac
ggcggccgccgcgtcgacgcctatggcatcagccgcatccgcaccccgtccggccgagtc
atctacacccacggcccgtccgaaggcggccaggccatcaacaatccgccgctctactac
atgaaccagatgctgcgcggggtgatcacctcgggcagcggccgctcggccgccatcggc
gggcgcgacatcgcaggcaagaccggcaccacttcggactacaaggacgcctggttcgtc
ggctacacgggcggcttcgtcgccgccgtctgggtcggcaaggacgacaacaagccgatg
gcccgcgtcaccggcggctcctcgcccgccgccatctggcgcggcttcatggaggcggcc
ctgcccaagctggcggttcaggccatccccaacggcccgcccctgcccgaaggctggatc
ccgcccgatcccgtcggcgacctgatgggtcaggtcgaggatccctacgccacggcccag
ccctatgaggacgcgccgccgcccgtcgtcatcgacggccaggccccgcagccgcaacag
cccccggcggcgcgccccgccccgccgcaagagcgccaaccggacgcgctgttcttctag
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