Bradyrhizobium vignae: BRAD3257_3681
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Entry
BRAD3257_3681 CDS
T06968
Symbol
rpoB
Name
(GenBank) RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bvz
Bradyrhizobium vignae
Pathway
bvz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRAD3257_3681 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvz03021
]
BRAD3257_3681 (rpoB)
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_3681 (rpoB)
Enzymes [BR:
bvz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRAD3257_3681 (rpoB)
Transcription machinery [BR:
bvz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BRAD3257_3681 (rpoB)
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BRAD3257_3681 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
SPP94695
UniProt:
A0A2U3PZX2
LinkDB
All DBs
Position
BRAD3257:3404356..3408480
Genome browser
AA seq
1374 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPPGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEQPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLMFALGLDGEAILSTFYKKILYKRT
KEGWRVPFDANRFRGYSTVNDLIDADTGKVVLEAGKKLTVRAARQLQEKGLKALRMADEE
LVGNYVAEDLVNPKTGEIHAEAGEEITDKLMKALNEQGYKELPLLDIDHVNVGPYIRNTL
AADKNMTREDALFDIYRVMRPGEPPTLESAQAMFQSLFFDAERYDLSAVGRVKMNMRLDL
DAPDTQRTLRKEDILSVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYSVAQANVPVDAKGRFTEDLVVCRSSGTRDVVPMTPDK
VDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVA
RDSGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPL
VKVGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTS
IHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPK
GESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIER
EEIERLAKDRDDEQAILDRNVYNRLAELLEGRQGIAGPKGFKKDTKITRAVLEEYPKSQW
WLFASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVK
RKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHL
GWACAGLGKRIGQTVDAYLSKQDIKPLKETLKRVYGEDETIKSLNDNELLELGHNLSRGV
PIATPVFDGAKEADIEEMLKLAGLDASGQSTVYDGRTGDPFDRKVTVGYIYMLKLHHLVD
DKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAG
RTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKMGPAPTSEAAE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgcgttcgcaagttcttcggacacatcaag
gaagtcgccgagatgccgaacctcatcgaggttcagaaggcgtcctatgaccagttcctg
atggtcgacgaacccccgggcggccgtctcgacgagggtctgcaggcggtgttccgctcg
gtgtttccgatctccgacttctcgggcacctcgatgctggaattcgtccgctacgagttc
gagcagccgaaatacgacgtcgacgagtgccgccagcgcggcatgaccttcgccgcaccc
ctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggaaaccggcgccaagtcg
gtgaaggacatcaaggagcaggacgtctacatgggcgacatcccgctcatgacgatgaac
ggcaccttcatcgtcaatggcaccgagcgcgtcatcgtctcgcagatgcaccggtcgccc
ggcgtgttcttcgaccacgacaagggcaagacccattcctcgggcaagctgctgttcgca
gcgcgcgtcatcccgtatcgcggctcctggctcgacatcgagttcgacgccaaggacatc
gtctatgcgcgtatcgaccgtcgccgcaagattccggtgacgtcgctgatgttcgcgctc
ggcctcgacggcgaagcgatcctgtccacgttctacaagaagatcctctacaagcggacc
aaggaaggctggcgcgttccgttcgacgccaaccgtttccgcggctactcgaccgtcaac
gacctgatcgatgccgacaccggcaaggtcgtgctcgaggccggcaagaagctcaccgtc
cgcgccgcccgccagctccaggagaaggggctgaaggcgctgcgcatggctgacgaggag
ctggtcggcaactacgtcgccgaggacctggtcaatccgaagaccggcgagatccacgcc
gaagccggcgaggagatcaccgacaagctgatgaaggctctcaacgagcagggctacaag
gagctgccgctgctcgacatcgaccacgtcaatgtcggtccctacatccgcaacacgctc
gcggccgacaagaacatgacgcgtgaggacgcgctgttcgacatctaccgcgtcatgcgt
ccgggcgagccgccgacgctggaatcggcccaggccatgttccagtcgctgttcttcgac
gccgagcgctacgacctctccgcggtcggccgcgtcaagatgaacatgcgcctcgacctc
gatgcgccggacacccagcgcacgctgcgcaaggaggacatcctctccgtcatcaagacg
ctggtggatctgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgc
cgtgtgcgttcggtcggcgagctcatggagaaccagtaccgcatcggcctgctgcgcatg
gagcgcgcgatcaaggagcgcatgtcctcggtcgatatcgacacggtcatgccgcaggat
ctgatcaacgcgaagcctgcggctgccgccgtgcgcgagttcttcggctcctcgcagctc
tcgcagttcatggaccagaccaatccgctcagcgagatcacccacaagcgccgtctctcg
gcgcttggaccgggcggtctgacccgcgagcgcgccggcttcgaggtgcgcgacgtgcat
ccgacgcattacggccgcatctgcccgattgagacgccggaaggtccgaacatcggcctg
atcaactcgctcgcgaccttcgcgcgcgtgaacaagtacggcttcgtcgagacgccgtat
cgcaaggtcaaggatggtcgtgtcaccgacgaggtcgtgtacctgtcggcgatggaggaa
gggcgctattccgtggcccaggccaacgtgccggtcgacgccaagggccgcttcaccgaa
gacctcgtggtctgccgctcgagcgggacccgcgacgtcgtgccgatgacgcccgacaag
gtcgactacatggacgtgtcgccgaagcagctcgtttcggtcgccgcggcgctgatcccg
ttcctcgagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcg
gtgccgctggtccgcgccgaggcgccgttcgtcggcaccggcatggagggcgtcgttgcc
cgtgactccggcgccgcgatcgcggcgcgccgctcgggcgtgatcgaccagatcgacgcc
acccgcgtcgtcatccgcgccacggaagatctcgatccgaccaagtcgggcgtcgatatc
taccgtctgatgaagtaccagcgctcaaaccagtcgacctgcatcaaccagcgtccgctg
gtgaaggtcggcgacatcgtcaagaagggcgacatcatcgccgacggtccgtcgaccgat
ctcggcgagctcgcgctcggccggaacgtgctggtcgcgttcatgccgtggaacggctac
aacttcgaagactcgatcctgctctccgagcggatcgtgaaggaagacgtcttcacctcg
atccacatcgaggagttcgaggtgatggcccgcgacaccaagctcggacctgaggaaatc
acccgcgacattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggtatc
gtctacatcggtgcggaagtgcgcgccggtgacatcctcgtcggcaagatcacgccgaag
ggcgaaagcccgatgacgccggaagagaagctcctgcgcgccatcttcggcgagaaggcc
tccgacgtccgcgacacctcgctgcgcgttcctccgggcgtgcagggcacgatcgtggaa
gtgcgcgtgttcaaccgtcacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgg
gaagagatcgagcgcctcgccaaggaccgcgacgacgagcaggcgatcctggaccgcaac
gtctacaaccgtcttgccgagctgctcgaggggcggcagggcattgcgggtccgaagggc
ttcaagaaagacaccaagatcacccgtgcggtgctcgaggagtacccgaagtcgcagtgg
tggctgttcgcttcgcccaacgacaagctgatggccgagatcgaggccatgcgaaagcag
tacgacgagtcgaagaaggggctggaacagcgcttcctcgacaaggtcgagaagcttcag
cgcggcgacgaattgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaag
cgcaagatccagcccggcgacaagatggccggccgccacggcaacaagggcgtggtgtcg
aagatcgtgccgatcgaggacatgccgttcctcgaagacggcacgcatgccgacatcgtg
ctcaatccgctcggcgtgccctcgcgcatgaacgtcggacagatcctcgagacccatctc
ggctgggcctgcgccggtctcggcaagcgtatcggccagacggtcgatgcctatttgtcg
aagcaggacatcaagccgctgaaggaaaccttgaagagagtctacggcgaggacgagacg
atcaagtcgctcaacgacaacgagctgctcgaactcggccataacctcagccgcggcgtg
ccgatcgcgacgccggtgttcgacggtgccaaggaagccgatatcgaggagatgctgaag
cttgccggtctcgatgcttcggggcagtcgaccgtctatgacggccgcaccggcgatccg
ttcgatcgcaaggtgacggtgggctacatctacatgctcaagctgcaccatctcgtcgac
gacaagatccatgcgcgttcgatcggtccgtactcgctcgtcacccagcagccgctgggc
ggcaaggcgcagttcggcggtcagcgcttcggcgaaatggaggtgtgggcgctcgaggct
tacggcgcggcgtacacgctccaggagatgctgacggtgaagtcggacgacgtcgccggc
cgcaccaaggtgtacgaggcgatcgtgcgcggcgacgacacgttcgaggccggtattccg
gaatcgttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacctgcac
aactccaagatgggaccggcgccgacgtcggaagcggccgagtaa
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integrated database retrieval system
