Berryella wangjianweii: HLV38_02720
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Entry
HLV38_02720 CDS
T09831
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bwa
Berryella wangjianweii
Pathway
bwa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bwa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HLV38_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bwa03021
]
HLV38_02720
03400 DNA repair and recombination proteins [BR:
bwa03400
]
HLV38_02720
Enzymes [BR:
bwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HLV38_02720
Transcription machinery [BR:
bwa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HLV38_02720
DNA repair and recombination proteins [BR:
bwa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HLV38_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKF07156
UniProt:
A0A6M8J5B2
LinkDB
All DBs
Position
complement(641926..646320)
Genome browser
AA seq
1464 aa
AA seq
DB search
MTIEFDVTNFDDIRISLASAEDIRGWSRGEVKKPETINYRTLKPEKDGLYCEKIFGPTKD
WECACGKYKRVRFKGIVCERCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGSPSRLGYL
LEISPKELEKVLYFASSIITSVDHEAREEDLDELRDDLAADLEELDAERDRLVASTRRLS
TDYVPEEDEFVDDIDDDERLTPEEVEEEIADIYEEFNERKALRQEAFEAFQRIEPKQLLS
DDALYREMRANYRDYFTGGMGAEAVRDLLEAIDLEATAEELTEVIATGKGQKRAKAIKRL
KVVDAFLKSENKPSDMILDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKR
LLDLGAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQN
LLGKRVDYSGRSVIVVGPELQMHQCGLPSKMALELFKPFVMKRLVELEYSLNIKAAKRAV
DRGASYVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAFNADF
DGDQMAVHVPLSAAAQAEARILMLSTNNIKSPAHGRPLTVPTQDMIIGLYYLTAARDGFP
GEGRAFVDFADARAAYDARADVDLQAKVLVRLTEDTQVAHAFDDIRLYKAGERIETTIGR
ITFNDVLPDDYPFLNYEMNKSQISRLVEDVCNVYPDSEVPRILDGLKSEGFHYATRAGVT
VSVYDATIPPEKKAILGAADAKVAGIDEEYEMGLMSYDERHRQIVDIWNKANDEVGDAMA
ANFDKFNPIYMMAFSGARGNIKQIRQLAGMRGLMSDPKGEIIDRPIKANFREGLTVLEYF
ISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIIREIDCGTAEGVPYALHDEKGELDE
NLIGRCLLEDAVSPEGEVLMSAGDYVSSMKQIRELEQAGLEEVVIRTVMTCHAHDGVCQK
CYGWDLATARPVNIGTAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITHGLPRVQELFE
ARKPKGLAVLAEIAGTLQISGDKNQKVLTIHDEEGNFREYEVSARAQMQPGVTDGCQVKV
GQQLTRGSVNPHDLLRLTDPNTTLRYIVSQVQGVYVSQGVDINDKHIEVVARQMLRKLTV
LDAGDSSYLPGLQVNRYEFKDAADSLIAEGKEPPVGQPLLLGITKASLATDSWMSAASFQ
ETTKVLTDAAIEGKVDSLRGLKENVIIGKPIPAGTGLKRYRSAELTYKGQAIAHAEGDAL
PEYAPDALREIEDLLPQPQDWTIDDGYLVPGGESYGRYGYPGHRGVQLTDEEARLYIFDD
LGVSQRWANKFSEVGIETVADLVGHTEDDLLRIEGIGAKALEELKAGLAAHDLSSVIEEE
LTASSDDMSQLLDMVFSPDDNILIGGDTPATFSTEGEDMLGEALPPRSYQRNLEELDALL
GSMGSYGFGITSREDEEAANSSDQ
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgaattcgatgtcaccaacttcgacgacatccgcatctcgctggccagcgcc
gaggatatccgcggctggtcgcgtggtgaggtgaagaagcccgaaaccatcaactaccgt
acgctcaagcccgagaaggacggcttgtactgcgagaagatcttcggcccgaccaaggac
tgggagtgcgcctgcggcaaatacaagcgcgtgcgcttcaagggcatcgtgtgcgagcgc
tgcggtgtggaggtgacccgctcgaaggtccgacgtgagcgcatgggccacatcgagctg
gcggcccccgtcagccacatctggtacttcaagggctcgccgagccgtctgggctacctg
ctcgagatctcgcccaaggagcttgagaaggtgctgtacttcgccagctccatcatcacc
tccgtggatcacgaggcacgtgaggaggacctggacgagctgcgcgacgacctggccgcc
gacctggaggagctggacgccgagcgcgatcgcctggttgcctccacgcgtcgtctgtcc
accgattacgtgccggaggaggacgagttcgtcgatgacatcgacgacgacgagcgcctc
acgcccgaagaggtggaagaggagatcgccgacatctacgaggagttcaacgagcgcaag
gccctgcgccaggaggccttcgaggccttccagcgcatcgagcccaagcagctgctgagc
gacgacgccctgtatcgcgagatgcgcgcgaactatcgcgactacttcaccggcggcatg
ggcgccgaggccgtgcgcgacctgcttgaggccatcgacctggaggccacggctgaggag
ctgaccgaggtcatcgccacgggcaagggccagaagcgcgccaaggccatcaagcgcctc
aaggtggtggacgcgttcctgaagtcggagaacaagccctccgacatgattctggacgtg
attccggtcattccgcccgacctgcgccccatggtgcagcttgacggcggccgcttcgcc
accagcgacctgaacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctgaagcgc
ctgctggacctcggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggag
gccgttgactcgctgttcgacaatggccgtcgcggccgcccggtcacgggtcccggcaac
cgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggccgcttccgtcagaac
ctgctgggcaagcgcgtggactactcgggccgttcggttatcgtggtgggtcccgagctg
cagatgcaccagtgcggccttccctcgaagatggcgcttgagctgttcaagcccttcgtg
atgaagcgcctggtggagcttgagtactcgctgaacatcaaggccgccaagcgcgccgtt
gaccgcggcgccagctacgtgtgggacgtgctggaagaggtcatccgcgagcaccccgtg
ctgctgaaccgcgctcccaccctgcaccgcctgggcatccaggccttcgagcccgtgctg
gtggagggcaaggccatcaagctgcacccgctggtgtgcaccgcgttcaacgccgacttc
gacggcgaccagatggccgtgcacgtgccgctgtccgccgctgcccaggcagaggcgcgc
atcctgatgctgtccaccaacaacatcaagtcgcccgcccacggccgcccgcttaccgtg
cccacgcaggatatgatcatcggcctgtactacctcacggccgcccgcgacggcttcccg
ggcgagggtcgcgccttcgttgacttcgccgacgcccgcgccgcctacgacgcccgcgcc
gacgtggacctgcaggccaaggtgctggtgcgcctcaccgaggacacccaggttgcccat
gccttcgacgacattcgcctgtacaaggccggcgagcgcatcgagaccaccatcggccgc
atcacgttcaacgacgtgctgcccgacgactatccgttcctcaactacgagatgaacaag
agccagatcagccgtctggtggaggacgtgtgcaacgtctaccccgactccgaggtgccc
aggatcctggacggtctgaagagcgagggcttccactacgccacgcgcgcgggcgtgacg
gtgtcggtgtacgacgccacgattccgcctgagaagaaggcgatccttggcgcggctgac
gcgaaggtggccgggatcgacgaggaatacgagatgggcctcatgtcctacgacgagcgc
catcgtcagatcgtggacatctggaacaaggccaacgacgaggtgggcgacgccatggcc
gccaacttcgacaagttcaaccccatctacatgatggcgttctcgggcgcccgcggtaac
atcaagcagattcgccagctggcgggcatgcgcggcctgatgtccgaccccaagggtgag
atcatcgaccgtccgatcaaggcgaacttccgcgagggcctgacggtgctggagtacttc
atctccacccacggcgcccgcaagggtctggccgacaccgcgctgcgtacggccgactcg
gggtacctgacccgtcgtctggtggacgtggctcaggacgtgatcatccgcgagatcgac
tgcggcaccgccgagggcgtgccctacgccctgcacgacgagaagggcgagctggatgag
aacctgatcggtcgctgcctgctggaagacgccgtgtcgcctgagggcgaggtgctgatg
agcgcgggcgactacgtttcctccatgaagcagattcgcgagcttgagcaggcgggtctg
gaagaggtggtcatccgcacggtcatgacctgccatgcgcatgatggcgtctgccagaag
tgctacggctgggacctggccaccgcacgtccggtgaacatcggcacggcggtgggcatc
atcgccgctcagtcgatcggcgagccgggcacgcagctgaccatgcgtacgttccacacc
ggcggcgtggccggcgacgacatcacgcacggtctgccccgcgtgcaggagctgttcgag
gcgcgcaagcccaagggccttgcggttctggccgagatcgccggcacgctgcagatttcg
ggcgacaagaaccagaaggtgctgaccattcacgacgaggagggcaacttccgcgagtac
gaggtgtcggctcgcgcgcagatgcagcccggtgtgacggacggctgccaggtgaaggtg
ggtcagcagctcacccgcggttcggtgaacccgcacgacctgctgcgcctgaccgacccg
aacaccacccttcgctacattgtcagccaggttcagggcgtgtacgtgtcgcagggcgtg
gacatcaacgacaagcacatcgaggtggttgcccgccagatgctgcgcaagcttaccgtg
ctggatgcgggcgactcgtcgtacctgcccggcctgcaggtgaaccgctacgagttcaag
gacgcagcggacagcctgatcgccgagggcaaggagccccccgtgggccagccgctgctg
ctgggcatcacgaaggcctcgctggccaccgactcgtggatgtcggccgcatcgttccag
gagaccaccaaggtgcttaccgatgccgcgatcgagggcaaggtggacagcctgcgcggt
ctgaaggagaacgtgatcatcggcaagccgattccggcgggcaccggcctgaagcgctat
cgcagcgccgagctgacctacaagggccaggccatcgcgcatgccgagggcgacgctctg
cccgagtacgcgcccgacgccctgcgcgagatcgaggacctgctgcctcagccgcaggat
tggaccatcgacgacggctatctggtgccgggcggcgagtcgtacggccgctacgggtat
ccgggtcatcgcggcgtgcagcttaccgacgaggaggcgcgcctgtacatcttcgatgac
ctgggcgtgtcgcaacgctgggccaacaagttctcggaggtgggaatcgagacggtggcc
gacctggtgggtcacaccgaggacgacctgctgaggatcgagggcatcggcgccaaggcg
cttgaggagctgaaggccggtctggcggcccacgacctgtccagcgtgatcgaggaggag
ctgacggcatccagcgacgacatgagccagctgctggacatggtgttctcgcctgatgac
aacatcctgatcggcggcgataccccggcaaccttctccaccgagggcgaggacatgctg
ggcgaggccctgccgccgcgctcgtaccagcgcaacctggaggagctggacgctctgctg
ggttcgatgggctcgtacgggttcggcattaccagccgcgaggacgaggaggctgcgaac
agcagcgaccagtag
DBGET
integrated database retrieval system
