Bacillus mycoides KBAB4: BcerKBAB4_0097
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Entry
BcerKBAB4_0097 CDS
T00642
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BcerKBAB4_0097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bwe03021
]
BcerKBAB4_0097
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_0097
Enzymes [BR:
bwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BcerKBAB4_0097
Transcription machinery [BR:
bwe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BcerKBAB4_0097
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BcerKBAB4_0097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ABY41366
UniProt:
A9VP69
LinkDB
All DBs
Position
113959..117492
Genome browser
AA seq
1177 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYSVEECKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEITELLGDNEYLSNTLEKDNTDSTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAAEGTVLDRRTLDRILPYLEKNIGFKTAKPMGGVVAGDVELQSIKIYAPESEGERSI
NVIGNANITRDIKHITPGDILASISYFFNLLYKVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNEFG
FIETPYRRVDPETGLVTGQVDYLTADEEDNYVVAQANMKLSEVGEFLDEDIVARFRGENI
VTNKERIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLINPESPIVGTG
MEYVSAKDSGAAVICKQPGVVERVEAREVWVRRYVDVDGQTVKGDLDRYKMQKFIRSNQG
TCYNQRPIVSVGDQVVKGEILADGPSMELGELALGRNVLVGFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDEL
PPGVNQLVRAYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAARYLGIHIATPVFDGAREEDVWGTIEEAGMANDAKTILYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVIGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKMMSINDTEIEMRDTEDDDDHQSADKLNVEVETTKE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatacggacgccaccgccaacgaagaagttatgcccgtatt
agtgaagtattagagttaccaaatcttatcgaaattcaaacctcttcttatcagtggttt
cttgatgagggtttgcgagaaatgttccaagacatttctccgatcgaagactttacggga
aatctatcgcttgaatttatcgactacagcttgggtgaacctaaatactctgtagaagaa
tgcaaagagcgtgatgtgacgtatgcagcaccacttcgtgtaaaagtgcgtctaatcaac
aaggaaactggtgaagtaaaagaacaagatgtgttcatgggagatttcccactcatgaca
gagactggaacattcgtaattaacggtgcagaacgtgttatcgtttcccagttagttcgc
tctccaagcgtatactatagtggcaaagtggataaaaacggaaaacgtggttttactgct
actgtaattccaaaccgcggagcttggttagagtatgaaacagatgctaaggatgttgta
tatgtgcgtattgaccgtacgcgtaaacttcctgtaactgttttgttacgcgcattaggg
tttggctctgatcaagaaatcaccgagcttttaggtgataacgaatacttaagcaatacg
ttagaaaaagacaacacagatagcactgagaaggcattgcttgaaatttatgagcgtcta
cgccctggtgaaccaccaacagtagaaaatgcaaagagcttacttgtgtctcgtttcttt
gatccgaagcgctacgatttagcaaatgtaggtcgctataagatcaacaaaaagctacac
attaaaaacagattgtttaaccaacgtttagctgaaacactggtggatccagaaactggt
gaaattttagcggcagaaggaacagtcttagatcgtcgtacactggatcgcattctacct
tacttagagaaaaacattggattcaaaacagcgaaaccaatgggtggagtggtagcaggc
gatgttgagctgcaatctattaagatttatgctccagaatcagaaggcgaacgatctata
aacgtaattgggaatgcaaatattactcgtgatataaaacacatcacaccaggtgatatt
cttgcttctattagctacttctttaacttgctatataaagtaggggatacagatgatatt
gaccacttaggaaatcgtcgtctgcgttctgtaggagagttactacaaaaccaattccgt
atcggtctttctcgtatggaacgtgttgttcgtgagagaatgtcgattcaagatacaaat
gcaattacaccacaagcgttaattaacattcgcccggttattgcatctattaaagagttc
ttcggaagttctcagttatctcagttcatggatcaaacaaacccattagcagagttaact
cacaaacgaagactatctgcattaggacccggtggtttaacgcgtgagcgcgcaggcttt
gaagtacgtgacgttcactactctcactatggtcgtatgtgtccaattgaaacaccagag
ggaccaaacatcggtttgattaactcattatcttcgtttgcgaaagtaaatgagtttggt
ttcattgaaacgccataccgtcgtgttgacccagaaactggtcttgtaacagggcaggtt
gattatttaacagcagatgaagaagataactatgttgtagcccaagcgaatatgaaatta
tctgaagtaggggaattccttgatgaagatatcgtagctcgtttccgtggtgaaaacatt
gtcacaaataaagaacgcatcgactacatggatgtatctccaaaacaagtagtgtcggca
gcgacagcttgtattccgttcttagaaaacgatgactctaaccgcgcacttatgggagcg
aacatgcaacgtcaggcggttccgttaataaatccggaatctccgattgtaggtacaggt
atggagtacgtatcagcaaaagactcaggtgctgcagtaatctgtaaacagcctggtgtc
gttgagcgcgtagaagcacgtgaagtttgggtacgtcgctatgtagacgttgacggtcaa
acagtaaaaggcgacttagatcgctacaaaatgcaaaaattcattcgttctaaccaagga
acttgctacaaccaacgtccaatcgtaagtgttggagaccaagttgtaaaaggtgaaatc
cttgcggatggtccttctatggaactaggtgaactggcgcttggacgtaacgtgcttgtt
ggctttatgacatgggacggttataactatgaggatgcgatcatcatgagtgagcgcctt
gtaaaagatgatgtgtacacttctatccatattgaagaatatgaatcagaagctcgtgat
acgaagcttggaccagaagaaattacacgtgatatcccgaatgttggagaagatgcactt
cgtaatcttgacgagcgcggtattattcgcgtcggtgctgaagtaaaagatggagatcta
cttgttggtaaagtaacgccaaaaggtgtaacagaattaacggcagaagaacgtctatta
catgcaatcttcggtgaaaaagcacgtgaagtacgtgatacatcactacgtgtaccacac
ggtggtggcggtattatcttagacgtaaaagtgtttaaccgtgaagatggcgatgaattg
ccaccaggcgtgaatcaacttgtacgtgcatatatcgttcaaaagcgtaaaatttctgaa
ggtgacaaaatggccggtcgtcatggtaacaaaggtgttatctcccgtattttaccggaa
gaagatatgccttacttaccagatggtacgccaatcgatatcatgttaaacccattaggg
gtaccatctcgtatgaatatcggtcaggtattagagcttcatcttggtatggcagcaaga
taccttggtattcacattgcaacaccggtattcgatggtgctcgtgaggaagatgtatgg
ggcacaattgaagaagctggtatggcaaatgacgcgaaaacaatcctgtatgacggacgt
actggtgagccattcgataaccgtgtatctgttggtgtcatgtatatgatcaaacttgcg
cacatggttgacgataaacttcatgctcgttctactggaccatactcacttgtaacgcag
caacctcttggaggtaaagctcagttcggtggacagcgtttcggtgagatggaggtttgg
gcacttgaagcttatggtgctgcttatactcttcaagaaatcttaacagtgaagtctgat
gatgttattggacgtgttaagacgtatgaagcaattgttaaaggtgaaaatgttccagaa
ccaggcgttcctgaatcattcaaagtattgattaaagaactgcaaagtttaggtatggac
gttaaaatgatgtctatcaacgatacagaaattgaaatgcgtgatacggaagatgacgat
gatcatcaatcagcagataaattgaatgttgaagttgagacaactaaggaataa
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integrated database retrieval system
