Bacillus mycoides KBAB4: BcerKBAB4_0956
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Entry
BcerKBAB4_0956 CDS
T00642
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03420
Nucleotide excision repair
bwe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BcerKBAB4_0956
03430 Mismatch repair
BcerKBAB4_0956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_0956
Enzymes [BR:
bwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BcerKBAB4_0956
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BcerKBAB4_0956
MMR (mismatch excision repair)
Other MMR factors
BcerKBAB4_0956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
PhoH
AAA_22
AAA_30
DEAD
NACHT
AAA_16
nSTAND3
Dpoe2NT
Motif
Other DBs
NCBI-ProteinID:
ABY42208
UniProt:
A9VI65
LinkDB
All DBs
Position
complement(1031326..1033662)
Genome browser
AA seq
778 aa
AA seq
DB search
MNKKLDQEQKRLDNVIETITEQIDKLESETGRRRAEVINIRKHFWDDVKVNTDTFDDYLE
TVINLRQQAQSLAVTQITHKHTFNRLAALRRMHKAPYFGRIDFKEEGEIGAEQIYIGVAT
LTDASGENFLIYDWRAPISSVYYDYPPGPAEYSTPGGVICGNVEKKLQYIIQNGEIDSMF
DTSLTIGDEILQQALGKGTNKHMQSIVATIQREQNEIIRHDEGRLLIVQGAAGSGKTSAA
LQRIAYLLYKYREWLKADQIILFSPNSMFNSYVSNVLPELGEENMQQVTFQEYLNHRLSK
SFDVEDPYEQLEYMLTETNSANYKTRNASIRFKASTQFFDMIRTYRQSLESSGMLFRGMK
FRGKLIASAKEITEQFYNTDSSLRFHNRIEKLTDWLNKQIDTIEKTELKKPWVEEEIELL
SKDEYQKAYKYLQKKGEFDDNSFNDYEKETKVLGRMIVRKKLKPLRKGVQTLRFINFTGI
YKQLFTDASWVTGEKPKEWDEICSLTVNMLDEGKLHYEDATPFLLLKELIEGFQTNRSIK
HVLVDEAQDYSPFQFEFLKRLFPAAKMTVLGDFNQAIFAHASEAVNFNTLTSLYGPDETN
GINLTRSYRSTKPIIEFTRALVPEGENIHAFERDGEKPTVTKASDYSELHDRITSKVAEL
QKQQHNTIAIICKSAAESAAAYEALSHIENIKLVKSNSAEYEQGIVVIPAYLAKGIEFDA
VIIYDASKDVYSDESLRRLFYTACTRAMHELQLYSVGEVSPFVTGAASESFECITKTP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaacttgatcaagagcaaaaacgattggataacgtaatagaaacgattacg
gagcaaattgataaactggaaagcgaaactggcagacgccgggcagaagtaatcaacatt
cgtaaacacttttgggatgatgtaaaagttaatactgatacttttgacgattatcttgaa
acagttatcaacttaagacaacaagctcagtcactagccgtaacacaaattacccataag
cacacctttaatcgacttgccgcactacgccgtatgcataaagcaccttacttcggacga
attgatttcaaagaagaaggagaaattggtgcagaacaaatttatatcggcgttgctaca
cttaccgatgcaagcggagaaaactttcttatatacgattggcgcgcaccaatttcaagt
gtttactacgattatccaccaggaccggctgaatacagcacaccaggaggcgtaatctgc
ggtaatgtggagaagaaattacaatatataattcagaatggcgagattgattcaatgttc
gatacgagcctcacaattggcgatgaaattctgcaacaagcgctcggaaaaggaacaaac
aaacatatgcaaagtatcgttgctactattcagcgcgagcaaaatgaaattatccgtcac
gatgaagggcgactacttatcgttcaaggagctgctggtagcggtaaaacgtcagctgcc
ctgcagcgaatcgcctacttactatataaatatcgcgaatggctaaaagcagatcaaatc
attctcttctcccctaactccatgttcaacagctacgtatctaacgtattgccagaactc
ggtgaagagaatatgcagcaagttacattccaagaatatttaaaccatagactaagtaag
tcatttgacgttgaggatccttacgagcaattagaatatatgctaactgaaacgaatagc
gcaaattataaaactcgaaatgcgagcattcgatttaaagcatctactcaatttttcgat
atgattagaacgtacagacaatctcttgaatcttcaggcatgctatttagaggaatgaaa
tttagaggaaaactgattgcctctgctaaagaaattacagagcaattttataatactgat
tcctccctccgcttccataatcgaattgagaagttaacggattggctaaacaaacaaata
gacacaattgaaaaaacagaactgaaaaagccttgggtagaagaagaaattgaactactt
agtaaagatgagtatcaaaaagcttataaatacttacagaaaaaaggcgagtttgatgac
aactcctttaatgattatgaaaaagaaacgaaagtactcggtcgtatgattgtccgtaaa
aaattaaaaccgttacgtaaaggcgttcaaacactacgttttatcaattttacaggcata
tataaacaactcttcacagatgcatcatgggttactggagaaaagcctaaagaatgggac
gaaatttgctcattaactgtgaacatgcttgatgaaggaaagctacattacgaggatgcg
actccatttttacttttaaaagaattaattgaaggcttccaaacgaacagatcaattaaa
cacgtactcgtagacgaagcacaagattattctccgtttcagttcgagtttttaaaacgt
ctcttccctgccgcaaaaatgacagtgctcggagactttaaccaagcaatatttgcccat
gcgagtgaagcagtgaatttcaatacacttactagcttatacggaccagatgaaacgaac
ggcattaacttaactcgtagctatcgttcaacaaaaccgattattgaatttacacgtgct
ctcgtaccagaaggagagaacattcacgcctttgaacgtgacggcgagaaacctacagtg
actaaagcttctgattacagcgaactgcatgatcgtatcacttctaaagttgctgaacta
caaaaacaacagcacaatacgatcgcaattatatgtaaatccgcagctgaaagtgccgct
gcctacgaagcactcagtcatatcgagaatattaaacttgtgaaaagtaactcagccgag
tacgagcaaggcatcgtcgttatccctgcttatttagcgaagggtatcgaatttgatgct
gtcattatttacgatgcttctaaagatgtgtacagtgatgaaagcctacgtagattgttc
tacactgcttgtacacgcgcaatgcatgaattgcagctttatagcgttggtgaggttagt
ccttttgtaacaggggctgcttcggagagttttgaatgtataacgaaaacaccttga
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