KEGG   Bacillus mycoides KBAB4: BcerKBAB4_0956
Entry
BcerKBAB4_0956    CDS       T00642                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bwe  Bacillus mycoides KBAB4
Pathway
bwe03420  Nucleotide excision repair
bwe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bwe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BcerKBAB4_0956
   03430 Mismatch repair
    BcerKBAB4_0956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bwe03400]
    BcerKBAB4_0956
Enzymes [BR:bwe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BcerKBAB4_0956
DNA repair and recombination proteins [BR:bwe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BcerKBAB4_0956
   MMR (mismatch excision repair)
    Other MMR factors
     BcerKBAB4_0956
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 SLFN-g3_helicase PhoH AAA_22 AAA_30 DEAD NACHT AAA_16 nSTAND3 Dpoe2NT
Other DBs
NCBI-ProteinID: ABY42208
UniProt: A9VI65
LinkDB
Position
complement(1031326..1033662)
AA seq 778 aa
MNKKLDQEQKRLDNVIETITEQIDKLESETGRRRAEVINIRKHFWDDVKVNTDTFDDYLE
TVINLRQQAQSLAVTQITHKHTFNRLAALRRMHKAPYFGRIDFKEEGEIGAEQIYIGVAT
LTDASGENFLIYDWRAPISSVYYDYPPGPAEYSTPGGVICGNVEKKLQYIIQNGEIDSMF
DTSLTIGDEILQQALGKGTNKHMQSIVATIQREQNEIIRHDEGRLLIVQGAAGSGKTSAA
LQRIAYLLYKYREWLKADQIILFSPNSMFNSYVSNVLPELGEENMQQVTFQEYLNHRLSK
SFDVEDPYEQLEYMLTETNSANYKTRNASIRFKASTQFFDMIRTYRQSLESSGMLFRGMK
FRGKLIASAKEITEQFYNTDSSLRFHNRIEKLTDWLNKQIDTIEKTELKKPWVEEEIELL
SKDEYQKAYKYLQKKGEFDDNSFNDYEKETKVLGRMIVRKKLKPLRKGVQTLRFINFTGI
YKQLFTDASWVTGEKPKEWDEICSLTVNMLDEGKLHYEDATPFLLLKELIEGFQTNRSIK
HVLVDEAQDYSPFQFEFLKRLFPAAKMTVLGDFNQAIFAHASEAVNFNTLTSLYGPDETN
GINLTRSYRSTKPIIEFTRALVPEGENIHAFERDGEKPTVTKASDYSELHDRITSKVAEL
QKQQHNTIAIICKSAAESAAAYEALSHIENIKLVKSNSAEYEQGIVVIPAYLAKGIEFDA
VIIYDASKDVYSDESLRRLFYTACTRAMHELQLYSVGEVSPFVTGAASESFECITKTP
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgaacaaaaaacttgatcaagagcaaaaacgattggataacgtaatagaaacgattacg
gagcaaattgataaactggaaagcgaaactggcagacgccgggcagaagtaatcaacatt
cgtaaacacttttgggatgatgtaaaagttaatactgatacttttgacgattatcttgaa
acagttatcaacttaagacaacaagctcagtcactagccgtaacacaaattacccataag
cacacctttaatcgacttgccgcactacgccgtatgcataaagcaccttacttcggacga
attgatttcaaagaagaaggagaaattggtgcagaacaaatttatatcggcgttgctaca
cttaccgatgcaagcggagaaaactttcttatatacgattggcgcgcaccaatttcaagt
gtttactacgattatccaccaggaccggctgaatacagcacaccaggaggcgtaatctgc
ggtaatgtggagaagaaattacaatatataattcagaatggcgagattgattcaatgttc
gatacgagcctcacaattggcgatgaaattctgcaacaagcgctcggaaaaggaacaaac
aaacatatgcaaagtatcgttgctactattcagcgcgagcaaaatgaaattatccgtcac
gatgaagggcgactacttatcgttcaaggagctgctggtagcggtaaaacgtcagctgcc
ctgcagcgaatcgcctacttactatataaatatcgcgaatggctaaaagcagatcaaatc
attctcttctcccctaactccatgttcaacagctacgtatctaacgtattgccagaactc
ggtgaagagaatatgcagcaagttacattccaagaatatttaaaccatagactaagtaag
tcatttgacgttgaggatccttacgagcaattagaatatatgctaactgaaacgaatagc
gcaaattataaaactcgaaatgcgagcattcgatttaaagcatctactcaatttttcgat
atgattagaacgtacagacaatctcttgaatcttcaggcatgctatttagaggaatgaaa
tttagaggaaaactgattgcctctgctaaagaaattacagagcaattttataatactgat
tcctccctccgcttccataatcgaattgagaagttaacggattggctaaacaaacaaata
gacacaattgaaaaaacagaactgaaaaagccttgggtagaagaagaaattgaactactt
agtaaagatgagtatcaaaaagcttataaatacttacagaaaaaaggcgagtttgatgac
aactcctttaatgattatgaaaaagaaacgaaagtactcggtcgtatgattgtccgtaaa
aaattaaaaccgttacgtaaaggcgttcaaacactacgttttatcaattttacaggcata
tataaacaactcttcacagatgcatcatgggttactggagaaaagcctaaagaatgggac
gaaatttgctcattaactgtgaacatgcttgatgaaggaaagctacattacgaggatgcg
actccatttttacttttaaaagaattaattgaaggcttccaaacgaacagatcaattaaa
cacgtactcgtagacgaagcacaagattattctccgtttcagttcgagtttttaaaacgt
ctcttccctgccgcaaaaatgacagtgctcggagactttaaccaagcaatatttgcccat
gcgagtgaagcagtgaatttcaatacacttactagcttatacggaccagatgaaacgaac
ggcattaacttaactcgtagctatcgttcaacaaaaccgattattgaatttacacgtgct
ctcgtaccagaaggagagaacattcacgcctttgaacgtgacggcgagaaacctacagtg
actaaagcttctgattacagcgaactgcatgatcgtatcacttctaaagttgctgaacta
caaaaacaacagcacaatacgatcgcaattatatgtaaatccgcagctgaaagtgccgct
gcctacgaagcactcagtcatatcgagaatattaaacttgtgaaaagtaactcagccgag
tacgagcaaggcatcgtcgttatccctgcttatttagcgaagggtatcgaatttgatgct
gtcattatttacgatgcttctaaagatgtgtacagtgatgaaagcctacgtagattgttc
tacactgcttgtacacgcgcaatgcatgaattgcagctttatagcgttggtgaggttagt
ccttttgtaacaggggctgcttcggagagttttgaatgtataacgaaaacaccttga

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