Paraburkholderia xenovorans LB400: DR64_33
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Entry
DR64_33 CDS
T03290
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DR64_33
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_33
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DR64_33
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GFIT
Motif
Pfam:
Ku
DUF1045
DUF3284
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
AIP30168
UniProt:
Q13Z48
LinkDB
All DBs
Position
1:complement(37226..38233)
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AA seq
335 aa
AA seq
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MAHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRTIDPVGYKQINKRTGKDVTRDN
IVRGFEYEKDKYVVLSDDEIRAANPESTQTVDILAFVDALDISFLYLDTPYFLTPDRKGE
KVYALLREAMKASGKIGVASVVLHNKQHLAALIPVGPVLALNTLRWAAEVRDFDEFKLPP
EGMKAAGVSARELDMAKKLIDDMSDKWDPSQYHDTFRDDIMALVDRKIRAGKTEEITEVE
APHESRQSADILDLSDLLKRSLGRGKGKPAAGGRKRAADDEDDAETAAPARKKPRAPRTT
STAANTTTRSRSSAGGRASAKTASTPAARKRRAAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcacacatgatctggaagggcgcaatcagcttcggcctcgttcacgtgccggtgcag
ttatatccggcgacgcaatcggagaaggtcggcttcaatctgctggacaaacgcacgatc
gacccggtcggctacaagcagatcaacaagcgtaccggcaaggacgtgacgcgcgacaac
atcgtgcgcggcttcgagtacgaaaaggacaagtacgtcgtgctctcggacgacgagatc
cgcgcggcgaaccccgagtcgacgcaaacggtcgatatcctcgcgttcgtcgatgcgctg
gacatttcgtttctctatctcgacacgccatatttcctcacgcccgaccgcaagggcgaa
aaggtctacgcgctgctgcgcgaagccatgaaggcgtcgggcaagatcggcgtggcgagt
gtcgtgctgcacaacaagcagcatctcgcggcgttgattccggtcggtccggtgctggca
ttgaacacgttgcgctgggccgcggaagtgcgcgacttcgacgaattcaagctgccgccc
gagggcatgaaagccgcgggggtgtccgcgcgcgaactcgacatggcgaagaagctgatc
gacgacatgagcgacaagtgggatccgtcgcagtatcacgacactttccgcgacgacatc
atggcgctggtcgatcgcaagattcgcgcgggcaagaccgaggagatcaccgaagtcgaa
gcgccgcacgagtcgcgtcaatccgctgacattctcgatctgtccgatctgctcaaacgc
agcctgggacgcggcaagggcaagccggcggcgggcggccgcaagcgcgctgccgacgac
gaagacgacgccgaaaccgcggcgccggcccgcaagaaaccacgcgctccgcgcaccacg
agcaccgccgcgaatacgacaacgcgtagccgcagcagcgcgggcggccgtgcgagtgcg
aagactgcctcgacgcctgcggcccgcaaacgccgcgcggcggcctga
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