Paraburkholderia xenovorans LB400: Bxe_A0918
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Entry
Bxe_A0918 CDS
T00340
Name
(GenBank) Excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
bxe
Paraburkholderia xenovorans LB400
Pathway
bxe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bxe_A0918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxe03400
]
Bxe_A0918
DNA repair and recombination proteins [BR:
bxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bxe_A0918
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bxe_A0918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_21
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ABE32027
UniProt:
Q13V62
LinkDB
All DBs
Position
1:3875207..3877906
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AA seq
899 aa
AA seq
DB search
MDAIRNKPRSTPPAPGANTFTGFVRVRGAREHNLKNVDVQIPRDALVVFTGVSGSGKSSL
AFGTLYAEAQRRYFESVAPYARRLIDQVGVPEVDAIEGLPPAVALQQQRGTPSARSSVGS
VTTLSSLVRMLYSRTGDYPPKQPMLFAEDFSPNTVQGACPTCHGLGRVYEVTEKSMVPDD
SLTIRERAIAAWPPAWHGQNLRDILVTLGYDVDTPWRDLPKKDRDWILFTDEQPTAPVYA
GLTPKETRAALKRKDEPSYQGTFTGARRYVLHTFANTQSALMKKRVSQFMIGSVCPACHG
KRLKKEALSVKFAGLDIGEFSQLPLARLTAMLEPIARGEWPETADANSGNGAGKTTGKGG
VLSRSAMRDAVDKRVAAGGSAHKASPDVRRTPNLSEEKRVAAQRIAAELLERLTTLVDLG
LGYLALERSTPTLSSGELQRLRLATQLSSQLFGVVYVLDEPSAGLHPADGEALFSALQGL
KAAGNSLFVVEHDLQMMRRADWLVDVGPAAGEAGGHVVYSGPPAGLAKVEASQTRRHLFA
PPAPVDRTPREPAGWLRLAGITRNNLHGLDAAFPLGCLTAVTGVSGSGKSSLVSQALPEL
VASHLGRAFENPDDDEQDSLLAAATAPTGGHIAEGMDAVRRLVRVDQKPIGRTPRSNLAT
YTGLFDHVRKLFADTPLARKRRYGAGRFSFNVAQGRCPTCEGEGFVSVELLFLPSVYAPC
STCHGTRYNPQTLEITWRDKNIAEVLGLTVDAACEFFADEASVMRALKVLRDIGLGYLRL
GQPATELSGGEAQRIKLATELQRAQRGETLYILDEPTTGLHPADVDRLMVQLQGLVDAGN
TVVVVEHDMRVAAQSDWVIDVGPGAGDAGGNIVASGTPAHVARAKESRTAGYLRQQLVA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatccgcaacaagccccgctcgacaccgcccgcacctggcgcgaacacattc
accggcttcgtgcgcgtgcgcggcgcgcgcgagcacaatctgaaaaacgtcgacgtgcag
attccgcgcgacgcgcttgtcgtgttcaccggcgtgtccggctcgggcaaatcgtcgctg
gcattcggcacgctgtacgcggaagcgcagcggcgctatttcgaatcggttgcgccgtat
gcgagacgcctgatcgaccaggtcggcgtgcctgaagtcgacgcaatcgaaggcctgccg
cccgcggtcgccttgcagcagcaacgcggcacgccgagcgcgcgctcgtcggtgggcagc
gtgacaacgctgtcgagcctcgtgcgcatgctgtattcgcgcaccggcgactatccgccg
aagcaacccatgctgttcgccgaagatttctcgccgaacacggtgcaaggcgcctgtccg
acttgccacggactcggtcgcgtgtatgaggtcaccgaaaaatcgatggtgcccgacgac
tcgctgaccattcgcgagcgcgcgatcgccgcatggccgcccgcatggcacggccagaat
ctgcgcgacattctggtcacgctcggctacgacgtcgatacgccgtggcgcgacttgccg
aagaaagaccgcgactggattctcttcacggacgaacaaccgaccgcgcccgtctacgcc
ggccttacgccgaaggaaacgcgcgccgcgctcaagcgcaaggacgagccgagctatcag
ggcaccttcaccggcgcgcggcgctacgtgctgcacacgttcgccaacacccaaagcgcg
ctgatgaaaaaacgcgtctcgcagttcatgattggcagcgtctgcccggcctgtcatggc
aagcggctcaagaaagaagcgctctcggtgaagttcgccgggctcgacatcggcgaattt
tcgcagttgccgctcgccagacttaccgcgatgctcgaaccgatcgcacgcggcgaatgg
ccggaaacggccgacgcgaattcgggcaacggcgccggcaaaaccaccggcaaaggcggc
gtgctcagcagaagcgccatgcgcgatgccgtcgacaaacgggtcgcagcgggcggctcc
gcgcacaaagcctcgcccgacgtgcggcgcacgcccaacctgtccgaggaaaagcgcgtc
gccgcgcaacgcatcgcggccgagctgctcgaacggctgacgacgctggtcgatctgggc
ctgggttatctcgcgctggagcgcagcacgcccacgctgtcgtccggcgaattgcagcgc
ctgcggctcgccacgcagttgtcgtcgcagttgttcggcgtcgtgtacgtgctcgatgag
ccgtcggccggtctgcatcccgccgacggcgaagcgctcttcagcgcgctgcaaggactg
aaggcggcgggcaattcgctgtttgtggtcgaacacgatttgcagatgatgcggcgcgcc
gactggctggtcgacgtcggtcccgcggcgggcgaagccggcggccatgtagtctatagc
gggccgcccgccggactcgcgaaggtggaggcgtcgcaaacgcgccggcatctgttcgcg
ccgcccgcgcccgtcgaccgcacgccgcgcgaacctgccggctggctgcggctcgccggg
atcacgcgcaacaacctgcacgggctggacgcggcgtttccgctcggctgcctgaccgcg
gtcaccggcgtatccggctcgggcaaatcgagcctcgtgagtcaggcgctgcccgagctg
gtggcaagccacctcggtcgcgctttcgaaaaccccgacgacgacgagcaagactcgttg
ctcgccgccgcgaccgcgccgaccggcggccatatcgccgaaggcatggatgccgtgcgg
cggctcgtgcgcgtcgatcagaaaccgatcggccgcacgccgcgctcgaacctcgccacg
tacaccggcctgttcgaccatgtgcgcaagctgttcgctgacacgccgctcgcccgtaag
cgccgctacggcgcgggccgcttttcgttcaatgtggcgcaaggccgttgcccgacttgc
gaaggcgagggttttgtcagcgtcgaactgctgtttctgccgagcgtctacgcgccctgc
tcgacgtgtcacggcacgcgctacaacccgcagacgctggaaatcacatggcgtgataaa
aacattgccgaagtgctcggcctgaccgtcgacgccgcctgcgaattcttcgccgacgag
gccagcgtgatgcgcgcgttgaaagtgctccgcgacatcggcctcggttatctgcggctc
ggccagccggccaccgaattgtccggcggcgaagcccagcgcatcaaactcgccaccgaa
ctgcagcgcgcgcaacgcggcgagacgctgtatatcctcgacgaaccgaccaccggcctg
catcccgccgacgtcgaccggctcatggtgcaactccagggactcgtggatgccggcaat
acggtggtggtcgtcgagcacgacatgcgggtggccgcgcaaagcgactgggtcatcgac
gtcggccccggcgccggagacgccggcggcaacatcgtcgcgagcgggacaccggcccac
gtcgcgcgtgcgaaggaaagccgcaccgccgggtatctgcggcaacagctcgtagcgtga
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