KEGG   Bipolaris zeicola: COCCADRAFT_4152
Entry
COCCADRAFT_4152   CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
bze  Bipolaris zeicola
Pathway
bze03013  Nucleocytoplasmic transport
bze03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCCADRAFT_4152
   03015 mRNA surveillance pathway
    COCCADRAFT_4152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bze03019]
    COCCADRAFT_4152
Messenger RNA biogenesis [BR:bze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     COCCADRAFT_4152
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 19149496
NCBI-ProteinID: XP_007711169
JGI: 4152
UniProt: W6Y9B7
LinkDB
Position
Unknown
AA seq 337 aa
MPSPSPSPARSPSPLRTRSPSRDRSHTRSPSRSRSPRSPSPRRSLSPRSRSRTRSRSPTS
LSPRRNGRRSYTPNTRSRSRGRSYTRSPTPRDASPAPRSSKIVVEALTRNVKEDHIREIF
GKYGVIKDVRMPMNPTFNINRGIAYVLYEEIDEAERAIAKMHDAQLDGSRIQVSIVLPRR
RFSQTPPPARRGPPPGDRFQDDFDSGYGRGGRGPRGGGPPGAYRPPPMDGPPRYRSPPRP
GLHRELRQTEATAGEIARHEEVALAAALAEPEDGEALVTAPTVVTAVGAETADDYAIFRA
AMCWKKLRFTWTEPSQAAFRAYCQLGFLRSERAWIYQ
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgccgtctccttctccgtctccagcacgctcgccatccccattgcgcacgcgcagccca
tctcgcgacaggtcgcatacacgatcaccgagccgctctcgttcaccacgctcgccatcg
ccacggcgctcactgtccccacggtctcggtcgcgtacccgatcccgctcgcccacatca
ctgtctccccggcgcaatggccggcgcagctacacaccaaacaccagatcgcgctcaaga
gggaggagttacactcgcagtcctacccccagggatgcgtcgccagcgccccggagttca
aagattgtggtagaagccttgaccagaaatgtcaaagaggatcacatacgtgagatattt
ggaaagtacggcgtcatcaaagatgtcaggatgcccatgaatcccacattcaacatcaat
cgcggtatcgcatacgtactctacgaggagattgacgaagccgagcgtgcaatcgcaaag
atgcatgacgcacagttggacggttccagaatccaagtctccatcgtgctccctcgacgt
cgcttctcccaaacacctcccccagcccggagaggcccaccgccaggcgacagattccaa
gacgacttcgacagcggatatggacgcggcggacgaggaccacgaggaggaggcccaccc
ggagcatacagaccaccgcctatggatggtcctccacgctaccgctctccaccgcgcccc
ggtctccatcgagaactccgccaaaccgaggctacggcaggagagatagcccgccacgaa
gaggtggccctagcggcagcactggcggagccagaggacggagaagccctagttacagct
cctacggtagtgaccgcagtcggagcagagaccgccgatgattacgctattttccgggct
gcaatgtgttggaagaagttacggtttacatggacggagccctcacaggcagcattcaga
gcgtactgccagttaggctttcttcgatcggaacgtgcatggatatatcagtga

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