Chelonoidis abingdonii (Abingdon island giant tortoise): 116818659
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Entry
116818659 CDS
T07367
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116818659
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116818659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
ATP-synt_B
IQ
Neur_chan_memb
HB_ELP1
K_channel_TID
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
116818659
NCBI-ProteinID:
XP_032625641
Ensembl:
ENSCABG00000004325
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFHYFTRESLAAIEQRIAEEKAKKSKKERKDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATSAVYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLVKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTLEINVISYFNSTM
GENGTFVNTTVSTFNWEEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICIKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAVAADSREFSGVGG
VGGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSEGEEKDEEDFHKSESEDSIRRKGFR
FSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDVGSENDFADDEH
STFEDNESRRGSLFVPHRHGERRNSNISQASRSSRMIPVLPANGKMHSTVDCNGVVSLVG
GPPALTSPGQLPEGTTTETELRKRRTSSYHISMDFLAEPRARQRAMSLASILTNTMEELE
ESRQKCPPCWYRFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITVCIVLNTLFMAME
HYPMTEQFSHVLSVGNLVFTGIFTAEMFLKIVAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMC
LIVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYVKR
KAREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTVIEIGKDLNYLKDGNGTTSGVG
SSMEKYVIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNASS
SSEGSTVDIGLPQEGEQPEIEPEEALEPEACFTEGCVRKFKCCQVSIEDGKGKIWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTNDERFDISQ
INNYSQCEDLINNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVLD
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSDEM
QYNLWWINLVFIVLFTGECILKLISLRYYYFTIGWNIFDFVVVILSIVGMFLADLIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPYKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKLQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDTLRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAFRRY
LLKQKIKKVSCMFNQVKDKDEDDLPIKEDMIIDKLNENSTPEKTDMTPSTTSPPSYDSVT
KPDKEKYEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacccgacagcttccactatttcacgagagag
tcacttgcagctatcgaacaacgtattgctgaagaaaaagctaagaagtctaaaaaagaa
cgtaaagatgatgatgatgaaaatggaccaaaaccaaatagtgacctggaggcaggaaag
acactgccatttatttacggcgacatacctccaggaatggtgtccgagcccttggaggat
ctggacccatattatatcaataaaaaaacttttatagtattgaatagagggaaggcaatc
ttccgattcagtgccacctctgccgtgtacatgttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattgttcagcatgcttattatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagagtggacaaagaatgtagaatac
acattcactggaatttatacttttgaatcacttgtaaaaattcttgcaaggggcttctgt
ttagaagattttacttttcttcgagatccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctcattcagtctgtgaagaagctctcagatgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggcacaaatgcttgcag
tggcctccagacaattctactttggaaataaatgttatttcctactttaatagcacaatg
ggcgaaaatggaacatttgttaatacaacagtgagcacatttaattgggaggagtacatc
gaggatagaagtcatttttactttttggaaggacaaaatgatgctctgctgtgtggcaat
agttcagatgcaggtcaatgtccagaaggatatatatgtataaaagctggtagaaacccc
aactatggctacacaagctttgacacattcagctgggcatttttgtcactctttcgactg
atgactcaggacttttgggagaatctttatcagctgactctacgtgctgctggcaaaaca
tatatgatattttttgttctggtaatttttctgggttctttctatctgattaacttgatc
ctggcggttgttgccatggcctatgaagaacagaatcaggcaaccatggaagaagcagag
cagaaggaggcagaatttcagcaaatgcttgaacagttgaaaaaacaacaagaagaagct
caggcagcagcagcagctgcagtagcagctgattcaagagagttcagcggagtaggtggg
gtaggaggattctctgaaagttcttctgaagcatcgaagttgagttcaaagagtgctaaa
gagagaaggaacagaaggaagaagagaaaacagaaggagcagtctgaaggagaggagaaa
gatgaggaagattttcacaaatctgaatcagaagatagcatcagaaggaaaggttttcga
ttctccattgaagggaacaggctgacatatgaaaagaggttctcttctccacatcagtct
ttgctgagcattcgtggctctctgttttccccaaggcgcagcagcagaacgagtcttttc
agcttccgaggtcgagcaaaggatgtaggatcagaaaatgactttgccgatgacgaacat
agtacttttgaagacaatgagagtagaagaggttctctctttgttccacatagacatggt
gaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatgataccagtgctt
cccgcaaatgggaaaatgcacagcactgtagattgcaatggagtggtttctttagttggt
ggacctccagctctcacgtcacctggacaactcccagagggcacaacaacagaaacagaa
ttaagaaagagacggacaagttcttaccatatttctatggatttcctagcagagcccaga
gcaaggcaaagagcaatgagtttagccagcatactcacaaacacaatggaagaacttgaa
gaatccaggcagaaatgcccaccatgctggtatagatttgctaatacatgcttgatctgg
gattgctgcactccatggttaaaagtaaaacatattgtaaatttgattgtgatggatcca
tttgtcgatcttgctattactgtctgcattgttttaaacacattgtttatggccatggag
cattatccaatgacggaacagtttagtcacgtgctttcagtaggaaatctggtctttact
gggatcttcacagcagaaatgtttctgaagatagttgctatggatccttattattatttc
caagaaggctggaatatttttgatggttttattgtgagccttagtttaatggagcttggt
cttgcaaatgtggaaggattatctgttctcagatcattcagattgcttcgagttttcaag
ttggcaaaatcttggccaacactgaatatgctgataaagattattggtaactcagtgggg
gctttgggaaatttgacgttggtgctggccatcattgtcttcatttttgctgtggttggt
atgcagctgtttggtaaaagctacaaggaatgtgtctgcaagatctccaatgactgtgaa
cttccacgctggcacatgcatgacttcttccactctttcttgatagtattccgagtgttg
tgtggagaatggatagagactatgtgggattgtatggaggttgcagggcaagccatgtgc
cttattgttttcatgatggtcatggtgattggaaacctagtggtactcaacctctttctg
gccttactgctgagctcatttagttcagacaatcttgcggctacagatgatgataatgaa
atgaacaatctccaaattgcagtggcaaggattcagaagggaatagattatgtgaaaaga
aaagcacgtgaattcatccaaaaagcctttgttagaaaacagaaagctttagatgaaatc
aagcctcttgaagatctaaacaacaaaaaagacagctgcatttccaaccatactgtcata
gaaataggtaaagaccttaactatcttaaagatgggaatggaactaccagtggcgtaggc
agcagcatggaaaaatatgtcatcgatgaaagtgattacatgtcattcataaacaatcca
agcctcactgtgacagtaccaattgctgttggggaatcagattttgaaaatttaaataca
gaagagtttagcagcgagtcagatctagaggaaagcaaagagaagctaaatgcatccagc
tcatctgaaggcagtacagttgatattggacttcctcaagaaggagaacagccagagata
gaacctgaagaagcccttgaaccagaagcctgttttacagaaggctgtgtacggaagttc
aagtgctgtcaagtcagcatagaagatgggaaaggaaaaatatggtggaatcttaggaaa
acctgctacaagatagttgaacacaactggtttgagaccttcattgtcttcatgattctc
ctcagcagtggtgctctggcttttgaagacatatacattgaacagcgcaagactatcaag
accatgctggaatatgctgataaggtcttcacttacatcttcattctggaaatgcttcta
aaatgggttgcttatggttttcaaacctatttcactaatgcctggtgctggctggacttc
ctaattgttgatgtctctttggttagcttaacagctaatgccttgggctactcagaactt
ggagcgattaaatcccttaggacattaagagctttgagacctctaagagccttgtcacga
tttgaagggatgagggtcgttgtgaatgccctcttaggagcaattccatccattatgaat
gtgcttcttgtttgtcttatattctggctaatcttcagcatcatgggagtaaatctgttt
gctggcaaattctactactgtgttaataccacaaatgatgagaggtttgatatcagccaa
atcaacaattatagtcaatgtgaggacctcataaacaacaatgaaactgccagatggaag
aacgttaaagtaaactttgataatgtaggacttggctatctttctctgcttcaagtagcc
acatttaaaggatggatggatataatgtatgcagctgtggattctcgaaatgtattggat
cagcctaagtatgaggacaacctgtacatgtacctttactttgtcatctttatcatcttt
ggatcattctttaccctgaatcttttcattggtgtcatcatagataatttcaaccagcaa
aaaaagaagtttggaggccaagacatctttatgacagaagaacagaagaaatattacaat
gcaatgaaaaagctggggtccaagaaaccacaaaaacctatacctaggccagcgaacaaa
ttccaaggcatggtctttgattttgtgacaaaacaagtatttgacatcagcatcatgatt
cttatctgtcttaacatggtcaccatgatggtagaaacagacgaccagagtgatgagatg
caatataatttatggtggattaaccttgtgttcattgtccttttcactggagaatgtatt
ctgaaactgatttcacttcgttattactatttcaccataggctggaacatttttgatttt
gtagttgtcattctctccatagttggtatgtttctagctgacctgattgaaaaatatttt
gtgtcccccaccttgttcagagttatccgacttgccagaataggtcgaatcctgcgtctc
attaagggtgctaaagggatccgcactctgctttttgctttgatgatgtctcttcctgct
ttgtttaacattggtctcctccttttcctggtcatgtttatctatgctatatttggaatg
tccaactttgcctacgttaagagggaagttggtattgatgacatgttcaactttgaaact
tttggcaacagtatgatctgcctatttcaaattaccacgtcagctggttgggatggttta
ttagcaccaattctgaacagtggagaaccagactgtgacccttacaaagatcaccccgga
agctcagttaaaggagactgtggtaacccttcagttgggattttcttttttgtcagttat
attatcatctcatttctagttgtagtaaacatgtatattgctgttattttggagaacttc
agtgttgctacagaagaaagtgccgagcccttgagtgaggatgactttgagatgttctat
gaggtttgggaaaagtttgatccagatgccacccagttcatagagttcagtaaactgtct
gattttgcagcttcactggatccccctcttcttatagcaaaaccaaacaaacttcagctt
attgcaatggatcttcccatggtaagtggtgacagaattcactgccttgacatcttgttt
gcttttacaaagcgtgttttgggggaaagtggagaaatggatacacttcgaatacaaatg
gaagatcggtttatggcagcaaatccttctaaagtctcctatgaaccgattacaaccaca
ttaaaacgaaaacaagaggaagtatctgctgtcattattcagcgagctttcagacgttac
cttttaaagcaaaaaattaaaaaagtttcatgtatgtttaaccaagttaaagataaagat
gaggatgacctgcctatcaaagaagatatgattatcgataagctaaatgagaactccact
ccagaaaaaacagatatgaccccttccacaacctctccaccttcctatgatagcgtaaca
aagccagacaaagagaaatatgaaaaagacaaatcagaaaaagaagacaaaggtaaagac
atcagggaaagtaaaaagtaa
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integrated database retrieval system
