Chelonoidis abingdonii (Abingdon island giant tortoise): 116818660
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Entry
116818660 CDS
T07367
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116818660
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116818660
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
116818660
NCBI-ProteinID:
XP_032625646
Ensembl:
ENSCABG00000005919
LinkDB
All DBs
Position
Unknown
AA seq
2014 aa
AA seq
DB search
MAQALLVPPGPDSFCYFTRESLAAIEKRAAEEKAKKPKQDHTDNDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKTIFRFSATSALYILTPVNPVRK
IAIKILVHSLFSMLIMCTILTNCVFMTLSNPPEWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTFEVNITSYLNSTM
DVNGTFVNTTVSTFNWKEYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQATVAVAAASVASKDLSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKELFEAEDKGDVEQFPKSESEDSIRRKS
FRFSMEANRLTYEKRFTSPHQSLLSIRGSLFSPRRNSRTSIFSFRGRAKDIGSENDFADD
EHSTLEDSESRRESFFGPNRHGERRNSNISEASTSSRMVPALPPNGKMHSTVDCNGVVSL
VGGPSALTSPTGQLLPELHLQGTTTETEIRKRRLSSYQISMEMLEDSAARQRAMSIASIL
TNTMEELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTVQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIV
SLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKIATDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQ
KGIDYVKKKLREFVQKAFVRKQKALEEIKALEDLNNKKDSCISNHTVVEISKDVNCLRDG
NGTTSGVGTGSSVEKYAIDENDYMSFINNPGLTVTVPIAIGESDFENLNTEEFSSESDME
ESKEKLNASSSSEGSTVDIAPPGEGEQAEIEPEEALEPIACFTEGCVQKFTCCQVSIEDG
KGKIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVF
TYIFILEMLLKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLR
ALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNT
TTSEMFDISDVDNYTQCEDLINKNESARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMY
AAVDSRNLLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIF
MTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMM
IETDDQSDEMETILHRINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGM
FLAKVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFL
VMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEP
DCDPYKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEP
LSEDDFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSG
DRIHCLDILFAFTKRVLGESDEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSA
TVIQRAYRCYILKQKVKKVSCMYNKDKTQGDGLPVKDMIIDKLNENSTPEKTYDSSSTTS
PPSYDSVTKPDKEKYEKDKVEKDDKGKNVRESKK
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcattgctggtaccaccaggacctgacagcttctgctattttactagagaa
tctctcgcagctattgaaaagcgtgccgcagaagaaaaagctaaaaaacccaaacaagat
catacagacaatgatgatgaagatggcccaaagccaaatagtgacttggaggcaggaaag
acactgccatttatttatggggacatacctccgggaatggtgtctgagcccttggaggac
ctggacccatattatatcaataaaaaaactttcatagtactgaataaaggaaagacaatt
ttccgattcagtgccacatctgccttgtacattttaactcctgtcaaccccgttagaaaa
attgctattaagattttggtacattcattgttcagcatgcttattatgtgcactattttg
accaactgtgtatttatgaccctgagtaaccctccggagtggacaaagaatgtagagtac
acattcactggaatttatacctttgaatcgcttataaaaattcttgcaaggggcttctgt
ttagaaggttttactttccttcgtgacccatggaattggcttgacttcagtgtcattttg
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcaga
gttctccgagcattgaaaacaatatcagtcattccaggcttgaagactattgtaggagcc
ctaattcagtctgtgaagaagctctcagatgtaatgatcctgactgtgttttgtctgagc
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggcataaatgcttgcag
tggcctccagacaattccacttttgaagtaaacattacttcctacttgaatagcacaatg
gacgtaaatggtacctttgttaatacaactgtgagcacgtttaactggaaggagtacatt
gaggatgaaactcatttttacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaatccc
aactatggctacacgagctttgacacattcagctgggcattcttgtcactctttcggctg
atgactcaggacttctgggaaaatctttatcaattgacgctacgagctgctggaaaaaca
tacatgatattttttgttctggtgatttttttgggctctttctatctggtgaatttgatc
ctggctgtggttgccatggcctatgaagaacaaaatcaagcaacactggaagaagcagag
cagaaagaggcagaatttcagcagatgcttgaacagctaaaaaaacaacaagaagaagct
caggcaacagtggcagtagcagcagcgtctgttgcgtcaaaagatttgagtggagtaggg
ggactaggggagctcttggaaagttcctcagaagcatcgaagttgagctcaaagagtgct
aaagaaaggagaaacagaaggaagaaaagaagacagaaggaactgtttgaagcagaggac
aagggagatgttgaacagttccccaaatctgaatcagaggacagtatcagaaggaaaagt
ttccgattctcgatggaagcaaatcgactgacatatgaaaagaggttcacttccccccac
cagtctttgctgagtattcgtggctccctgttttccccaaggcgcaacagcagaacgagc
attttcagcttcagaggtcgagcaaaagatataggatcagaaaatgacttcgctgatgat
gagcacagcactcttgaagacagcgagagcagaagagagtctttctttggtccaaacaga
catggtgaaagacgcaatagtaacattagtgaagccagtacgtcatccaggatggtacca
gcgcttccaccaaatgggaagatgcacagcactgtagattgcaatggggtggtttctttg
gttggaggaccttcagctctcacttcgcctactggacaacttctcccagagcttcatttg
cagggcaccactacagaaacagaaataagaaaaagaagattgagttcttatcaaatttcc
atggaaatgttggaagattctgctgcaagacaaagagcaatgagtatagccagcatactc
acaaacacaatggaagaacttgaagaatccagacaaaaatgtccaccatgctggtacaga
tttgcaaacactttcttgatctgggactgttggagcccatggttaaaagtaaaacatata
gtcaatttggttgtgatggatccatttgttgatcttgctattactatctgcattgttcta
aacacgttgtttatggccatggaacactacccaatgacagtacagttcagcagtgtgctt
agtgtgggaaacctggtatttacggggatcttcacagcagaaatggttttaaagataatt
gccatggatccttattattatttccaagaaggctggaatatttttgatggtattattgtc
agccttagtttaatggaacttggccttgcaaatgttgaaggattatcagttctccgatca
ttcagattgctccgagttttcaagttggcaaaatcttggccaacgctgaatatgctgata
aagattattggtaactcagtgggggctttgggaaatttgacgttggtgctggccatcatt
gtcttcattttcgctgtggttggtatgcagctgtttggtaaaagttacaaagactgtgtc
tgcaagattgctacagactgcgtacttccacgctggcacatgcatgactttttccactct
ttcttgattgtattccgagtgttgtgtggagaatggatagagactatgtgggattgtatg
gaggttgcaggccaagccatgtgccttattgttttcatgctcgtcatggtcattggaaac
cttgtggtattgaacctgtttctggccttgctgctgagctcatttagttcagataacctt
gctgctacagatgatgataatgaaatgaacaatctccagattgccgttgcaaggattcag
aagggaatagattatgtgaaaaaaaaattacgggaattcgtccaaaaagcctttgttaga
aagcaaaaagcactagaggaaatcaaagcacttgaagatctaaacaacaagaaagacagc
tgcatttccaatcatactgttgttgaaataagcaaagatgttaattgtcttagagatggg
aatggaactaccagtggtgtaggaacaggcagcagtgtggaaaaatatgcaattgatgaa
aatgattatatgtcattcataaacaatcccggccttactgtgacagtacctattgctatt
ggagaatcagattttgaaaatttaaacacagaagagtttagcagtgagtcggatatggaa
gaaagcaaagagaagctaaatgcatccagctcatctgaaggcagcacagttgatattgcc
cctcctggagagggcgaacaagctgagattgaacctgaagaagctcttgaaccaatagcc
tgttttacagaaggttgtgtgcagaagttcacatgttgtcaagtaagtatagaagatggc
aaaggcaaaatctggtggaatcttaggaaaacctgctacagcatagttgaacacaactgg
tttgagacattcattgtcttcatgattcttctgagcagtggtgctctggcttttgaagac
atatatatagagcagcgcaagactatcaagactatgctggaatatgctgacaaggttttc
acttacatcttcattctggaaatgcttctgaaatgggtggcctatggttttcaaatgtat
ttcactaatgcctggtgctggctggacttcttgattgttgatgtgtcgttggttagtcta
atagccaatgcgttgggctattccgaacttggtgccattaaatcgcttaggacactaaga
gctttgagacctctaagagccttgtcacgatttgaagggatgagggtggttgttaatgcc
ctgataggagcaattccatccatcatgaatgtgctactggtttgtctgatattctggcta
atcttcagcatcatgggagtaaatctgtttgctggcaagttctaccactgtgttaacaca
acaactagtgagatgtttgatatcagcgatgttgacaattatactcagtgcgaggacctc
ataaacaagaatgaaagtgcccgatggaaaaatgtgaaagtaaacttcgataatgtaggt
gctgggtatcttgcgctgcttcaagtagctacatttaaaggatggatggatattatgtat
gcagctgttgattcacgaaatctattagatcagcctaagtatgaggacaacctgtacatg
tatctttactttgtcatctttatcatctttggatcattcttcaccttgaaccttttcatt
ggtgtcatcatagacaacttcaatcaacaaaaaaagaagtttggaggtcaagacatattt
atgacagaagaacagaagaaatattacaatgcaatgaaaaaactggggtccaagaaacca
caaaaacctatacctaggccagcgaacaaattccaaggcatggtctttgattttgtaaca
aaacaagtatttgacatcagcatcatgattcttatctgccttaacatggtcaccatgatg
atagaaacagatgaccagagtgatgagatggaaactattttacacaggataaacctggta
ttcattgtccttttcactggagaatgtgtcctgaaattgatttcactccgttattactac
ttcaccataggctggaacatttttgattttgtggttgtcattctctccattgtgggtatg
tttctagctaaggtgattgaaaaatattttgtgtcccccaccttgttcagagttattcga
ctcgccagaattggccgaatcctacgtctcattaagggtgctaaagggattcgtactctg
ctttttgctttgatgatgtctcttcctgctttgtttaacattggtctcctgcttttcctg
gtcatgtttatctatgctatatttggaatgtccaactttgcctatgttaagagggaagtt
gggattgatgacatgttcaactttgaaacttttggcaacagtatgatctgcctatttcaa
attaccacgtcagctggttgggatggtttgttagcgccaattcttaacagtggagaacca
gactgtgacccttataaagatcaccccggaagctcggttaaaggagactgtggtaaccct
tcagttgggattttcttttttgtcagttatattatcatctcatttctagttgtagtaaac
atgtatattgctgttattttggagaacttcagtgttgctacagaagaaagtgccgagccc
ttgagtgaggatgactttgagatgttctatgaggtttgggaaaagtttgatccagatgca
acccagttcatagaatacagtaaactgtctgattttgcagcttcactggatcctcctctt
cttatagcaaaaccaaacaaagttcagcttatcgcaatggatcttcccatggtaagtggt
gacagaattcactgccttgacatcttgtttgcttttacaaagcgtgttttgggggaaagt
gatgagatggatgcacttcgaatacagatggaagaccggtttatggcagccaatccttct
aaagtctcctatgagccaattacaactacattaaaaagaaaacaagaggaagtatctgct
actgttattcagcgtgcttacagatgttacattttaaagcaaaaagttaaaaaagtctcc
tgtatgtataacaaagataaaacccaaggggatggcctacctgtcaaagatatgattatt
gataaactcaatgaaaactccactccagaaaaaacatatgatagctcctctacaacctcc
ccaccttcctatgatagtgttacaaagccagacaaagagaaatatgaaaaagataaagta
gaaaaagacgataaaggtaaaaatgttagggaaagtaaaaaataa
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integrated database retrieval system
