Chelonoidis abingdonii (Abingdon island giant tortoise): 116820549
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Entry
116820549 CDS
T07367
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04514
Cell adhesion molecule (CAM) interaction
cabi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116820549 (CNTN1)
04517 IgSF CAM signaling
116820549 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116820549 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cabi00537
]
116820549 (CNTN1)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
Contactins
116820549 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cabi00537
]
Others
116820549 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Fn3_VIN3
Adeno_E3_CR1
Interfer-bind
Tissue_fac
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
116820549
NCBI-ProteinID:
XP_032628993
Ensembl:
ENSCABG00000007268
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MKMWLLISHLVTVCFVFCLAEDGKGYGPVFEEQPIDTIYPEESTDGQVSMNCRARAIPFP
TYKWKLNNWDIDLTKDRYSIVGGRLLINNPEKSKDAGKYVCIASNIFGTVRSTEATLSFG
YLDTFPPEERYEVKVREGVGAVLLCDPPYHSPDDLSYRWLLNEFPVFITLDKRRFVSQTN
GNLYIANVEASDRGNYSCFVSSPSITKSVFSKFIPLIPQAVDRSKVYPADIKVKFKDTYA
LLGQNVTLECFALGNPVPEIRWNKYLEPMPATAEISMSGAVLKILNIQFEDEGTYECEAE
NYKGKDKHQARVYVQAYPEWVEHINDTERDIGSDLYWPCVATGKPTPTIRWLKNGVSFRR
GELRIQSLTVEDAGMYQCIAENVHGIIYANAELKVVASPPNFELNPMKKKILAAKGGRVI
IECKPKAAPKPKFSWSKGTELLVNGSRISIWDDGSLEIVNITKLDQGSYTCFAENNRGKA
NSTGTLEITEATKITLAPTNVDVTVGENATMQCIASYDTTLDLTFIWSLNGYMIDFEKEH
DHYERSVMIKNNGEMRIKNVQLQHAGRYTCTAQTIVDNSSASADLIVRGPPGPPGGLRIE
DIKDTSVTLTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDPPNVEGNMETAKVIDLIP
WMEYEFRITAMNTLGTGEPSMPSQRIRTEGAAPNVAPSDVGGGGGSNRELTITWMPLSRE
YHFGKNFGYIVAFKPFGEKEWRRVTVTNPDVGRYVHKDDSLPPSTKFQVKVKAFNNKGDG
PFSLVAIIYSAQDAPTEQPRNVNVKVLSSSEISVSWEHVFEQSVEGYQIRYWTVHDKEAA
AQRVLVSSQDYSTRLENLKPSTRYHVDVSAYNSAGYGPPSVAADIITRKAPPSQRPRIIS
TVRSGSRYIITWDHVTPKSNESAVQGYKVLYRPDGQHEGTLYSTGTHSIELPVPRDGEYI
VEVRAHSEGGDGEVAQIKISGAAGVSPGLLGLLLTAIGVLAYLEF
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggctcttaatcagtcatcttgttacagtgtgtttcgtcttctgcctggca
gaggatggaaaaggatatggcccagtttttgaggagcaacccattgataccatctaccct
gaggaatctacagatggacaagtttcaatgaactgcagagctcgagcaatcccttttcca
acttacaagtggaaactaaataactgggatattgatttaacaaaggatcgctacagtatc
gtgggaggtagacttcttatcaataacccagagaaatcaaaggatgctgggaaatatgtt
tgtatagcatcaaatatctttggaactgtccgaagcactgaagctactctaagttttgga
tatcttgatacgtttccacccgaggaacgctatgaggtgaaagtacgggagggtgttgga
gcagtgcttctttgcgaccctccttaccattccccagatgatctcagttatcgctggctt
ctaaatgagttcccagtattcattactttggacaaacggcgatttgtgtcacagacaaat
ggcaatctctacattgcaaatgtagaagcatcagatagaggcaattattcatgttttgtg
tccagtccttcaatcacaaagagtgtattcagcaaattcattccacttattccccaggca
gtagaccgatctaaagtatatccagctgatatcaaggttaagttcaaggatacatatgcg
ctcctggggcaaaatgtgacactggaatgttttgcacttgggaaccctgttccagagatt
agatggaataagtatcttgaacccatgccagcaactgctgagataagcatgtctggtgca
gttctcaagatcttaaatattcagtttgaagatgaaggaacttatgaatgtgaagctgaa
aactataaaggaaaagataaacatcaggcaagagtttatgttcaagcatatccagaatgg
gtagaacatatcaatgacacagagagagacataggcagtgatttatactggccttgtgta
gccacaggcaagcctactccaacaatcaggtggttgaaaaatggagtatcgttccggaga
ggtgaattaagaatacaaagcctgactgtcgaggatgccggcatgtatcagtgtatagca
gaaaatgtacatggaattatatacgcaaatgctgagctgaaggttgtggcttcacctcct
aattttgaactgaacccaatgaagaagaagatcttggctgctaaaggaggccgtgtaata
attgaatgcaagcctaaagctgctcctaaaccaaaattctcatggagcaaaggaacagaa
ctgctcgtaaatgggagcaggatatctatttgggatgatggtagcctggaaattgttaat
atcacaaagctggatcaaggcagctacacatgttttgcagaaaataaccgaggaaaagct
aacagtactggtactctagaaatcacagaagctacaaagattaccttagcaccaactaat
gttgatgtcacagttggagagaatgccaccatgcagtgtattgcgtcctatgataccacg
ttagatctgacatttatttggtctctaaatggctacatgatagattttgaaaaagaacat
gatcattacgaaagaagtgttatgataaagaacaatggtgaaatgcgtattaaaaatgta
cagctgcagcatgctggaagatacacgtgcacagcacagacaattgttgacaactcctca
gcttcagctgaccttattgtaagaggtcctccaggtccccctggggggttgagaatagaa
gatattaaagacacttctgtaacacttacttggagtcgtgggacagacaatcatagccct
atttcaaagtacactatccagtcaaagacttttctttctgaggagtggaaagatgccaaa
acagatcccccaaacgttgaaggaaatatggagacagcaaaggtgattgatttaatccca
tggatggagtatgaattccggataacagcaatgaatactttggggacaggagaacctagt
atgccatcacaaagaattagaacagaaggagctgctcctaatgtggctccttctgatgtt
ggaggagggggtggaagtaaccgagagctgacaataacatggatgcctttgtcaagagag
taccactttggcaagaattttggttacatagtagcctttaaaccatttggtgaaaaggaa
tggagaagagttacagttaccaatcctgatgttggccgatacgtgcacaaagatgactct
ctgcccccctcaacaaagtttcaagtaaaagtgaaagcatttaacaacaaaggggatgga
ccgttcagccttgttgccatcatttattcagcacaagatgctcctactgaacagcctaga
aatgtgaatgtaaaagtcttatcatcttctgaaatctccgtttcctgggagcatgttttt
gagcaatctgttgaaggatatcagattcgttactggactgttcatgacaaagaagccgct
gcgcagcgggtgctagtgagcagtcaggactactcaaccagactggaaaatttgaaacct
agtacccggtaccatgtagatgtttccgcctacaatagtgcaggatatggaccacccagt
gttgctgctgatatcattacaagaaaagcacctccaagccaacgtcccagaattatcagt
acagtcaggtctggttcaaggtacatcatcacctgggaccatgtcacgccaaagtcaaat
gaatctgctgttcaaggatacaaagtgctgtatagaccagatggccagcatgagggcaca
ttgtattcaactggcacacattcaatagagttgccagtccccagagatggtgaatatatt
gttgaggttcgagcacacagtgaaggaggagatggagaagtagctcaaataaaaatttca
ggtgctgctggagtatcacctggtcttcttggcttattgctgactgccattggtgtcctt
gcctacttagaattctga
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